Pre_GI: BLASTP Hits

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Query: NC_003198:1908238:1930637 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 1930637, End: 1931689, Length: 1053

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020211:2094500:2094544209454420956111068Serratia marcescens WW4, complete genomerecT family protein8e-111400
NC_009792:1770106:1793818179381817949061089Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-98359
NC_015663:4522109:4544187454418745452961110Enterobacter aerogenes KCTC 2190 chromosome, complete genomerecombinase, RecT family protein3e-87322
NC_010102:1829357:1834772183477218358811110Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein8e-86317
NC_011080:2761403:2776225277622527773341110Salmonella enterica subsp. enterica serovar Newport str. SL254,gifsy-1 prophage protein2e-85316
NC_016856:2812905:2827727282772728288361110Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Senterohemolysin 1-like protein2e-85316
NC_017046:2756000:2773259277325927743681110Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage protein5e-85314
NC_013850:2182337:2187585218758521886941110Klebsiella variicola At-22 chromosome, complete genomeDNA single-strand annealing protein RecT-like protein7e-85314
NC_011283:3177350:3193674319367431947831110Klebsiella pneumoniae 342 chromosome, complete genomerecombinase, RecT family2e-84313
NC_012779:1966205:1968696196869619697661071Edwardsiella ictaluri 93-146, complete genomegifsy-1 prophage protein3e-76285
NC_013508:1687432:1710552171055217116221071Edwardsiella tarda EIB202, complete genomehypothetical protein2e-74279
NC_020181:929000:935813935813936751939Enterobacter aerogenes EA1509E, complete genomeGifsy-2 prophage RecT1e-72273
NC_009648:1541699:1545742154574215467431002Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative entero exodeoxyribonuclease VIII1e-65250
NC_015379:4691868:469812046981204699088969Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative gifsy-1 prophage protein3e-60232
NC_014306:3524980:357608635760863576961876Erwinia billingiae Eb661, complete genomegifsy-2 prophage RecT, probable fragment4e-50199
NC_011894:3671162:368968436896843690595912Methylobacterium nodulans ORS 2060, complete genomehypothetical protein2e-26120
NC_011894:7035285:7057259705725970582841026Methylobacterium nodulans ORS 2060, complete genomehypothetical protein1e-24114
NC_017033:2081206:209771320977132098534822Frateuria aurantia DSM 6220 chromosome, complete genomehypothetical protein3e-1686.3
NC_011294:1006630:101357910135791013812234Salmonella enterica subsp. enterica serovar Enteritidis str7e-1065.1
NC_010674:2856997:286607328660732866816744Clostridium botulinum B str. Eklund 17B, complete genomehypothetical protein1e-0654.3