Pre_GI: BLASTP Hits

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Query: NC_003198:1771432:1792901 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 1792901, End: 1793710, Length: 810

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:1182496:118639411863941187203810Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-154544
NC_004631:1182883:118742211874221188231810Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative regulator2e-154544
NC_014121:1589389:162078716207871621596810Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative transcriptional regulator4e-134477
NC_021066:839734:875912875912876724813Raoultella ornithinolytica B6, complete genomehypothetical protein4e-127454
NC_013508:1491945:151879715187971519666870Edwardsiella tarda EIB202, complete genomeputative transcriptional regulator8e-77286
NC_014012:3812754:381576138157613816549789Shewanella violacea DSS12, complete genomehypothetical protein2e-1996.3
NC_009659:2849000:285295628529562853795840Janthinobacterium sp. Marseille chromosome, complete genomehypothetical protein3e-1892
NC_002488:1430680:144215214421521443039888Xylella fastidiosa 9a5c, complete genomehypothetical protein9e-1684.3
NC_019757:5085648:510678951067895107613825Cylindrospermum stagnale PCC 7417, complete genomehypothetical protein3e-1375.9
NC_020209:397376:403206403206404009804Pseudomonas poae RE*1-1-14, complete genomehypothetical protein6e-1064.7
NC_010501:908000:912136912136912942807Pseudomonas putida W619, complete genomehypothetical protein5e-0961.6
NC_015677:2939301:296382729638272964678852Ramlibacter tataouinensis TTB310 chromosome, complete genomehypothetical protein4e-0858.9
NC_008027:4889662:491750149175014918307807Pseudomonas entomophila L48, complete genomehypothetical protein5e-0755.1