Pre_GI: BLASTP Hits

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Query: NC_003143:1630000:1630083 Yersinia pestis CO92, complete genome

Start: 1630083, End: 1632221, Length: 2139

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a recent Orientalis subtype isolated in the USA from a patient who died of pneumonic plague after acquiring the disease from an infected cat. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008149:2802392:2851538285153828536762139Yersinia pestis Nepal516, complete genomemembrane protein01292
NC_012880:3125261:3148545314854531507102166Dickeya dadantii Ech703, complete genomehypothetical protein0924
NC_014618:2989000:3009645300964530117802136Enterobacter cloacae SCF1 chromosome, complete genomeYccS/YhfK family integral membrane protein0916
NC_013892:753307:7533077533077554692163Xenorhabdus bovienii SS-2004 chromosome, complete genomeefflux transporter (PET family)0888
NC_010519:275976:2759762759762781412166Haemophilus somnus 2336 chromosome, complete genomehypothetical protein4e-126452
NC_015424:3277292:3277292327729232794572166Aeromonas veronii B565 chromosome, complete genomehypothetical protein6e-118425
NC_014752:23601:2360123601257512151Neisseria lactamica ST-640, complete genomehypothetical protein2e-114413
NC_020156:3157899:3178799317879931810572259Nonlabens dokdonensis DSW-6, complete genomemembrane protein containing DUF8935e-31136
NC_007951:1768236:1794013179401317966642652Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative aromatic acid exporter, ArAE family1e-30135
NC_002929:2589202:2590082259008225918391758Bordetella pertussis Tohama I, complete genome2e-1584.7
NC_010681:1234500:1254765125476512568642100Burkholderia phytofirmans PsJN chromosome 1, complete sequenceprotein of unknown function DUF893 YccS/YhfK3e-1377.4
NC_012721:2021885:2025589202558920277392151Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein2e-1275.1
NC_011000:2732330:2747653274765327498362184Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein1e-1172
NC_012881:3004784:3027117302711730282111095Desulfovibrio salexigens DSM 2638, complete genome2e-1171.2
NC_010674:3619722:3619722361972236216231902Clostridium botulinum B str. Eklund 17B, complete genomehypothetical protein4e-0963.9
NC_010723:3434000:3434052343405234359801929Clostridium botulinum E3 str. Alaska E43, complete genomehypothetical protein3e-0861.2
NC_017347:2616000:2637563263756326393861824Staphylococcus aureus subsp. aureus T0131 chromosome, completemembrane protein7e-0859.7
NC_007622:2501562:2518225251822525202252001Staphylococcus aureus RF122, complete genomeprobable membrane protein1e-0758.9
NC_017337:2588331:2605717260571726075401824Staphylococcus aureus subsp. aureus ED133 chromosome, completemembrane protein3e-0757.8
NC_017342:751496:7514967514967533191824Staphylococcus aureus subsp. aureus TCH60 chromosome, completehypothetical protein1e-0655.5
NC_002952:2653482:2670496267049626723191824Staphylococcus aureus subsp. aureus MRSA252, complete genomehypothetical protein2e-0655.1
NC_012881:2957309:2966699296669929677781080Desulfovibrio salexigens DSM 2638, complete genomeprotein of unknown function DUF9394e-0653.9
NC_012108:5273289:5274192527419252752771086Desulfobacterium autotrophicum HRM2, complete genomehypothetical protein6e-0653.5