Pre_GI: BLASTP Hits

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Query: NC_003134:64672:77219 Yersinia pestis CO92 plasmid pMT1, complete sequence

Start: 77219, End: 77590, Length: 372

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a recent Orientalis subtype isolated in the USA from a patient who died of pneumonic plague after acquiring the disease from an infected cat. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005815:61148:101236101236101631396Yersinia pestis biovar Microtus str. 91001 plasmid pMT1, completehypothetical protein8e-66248
NC_004838:51013:544085440854803396Yersinia pestis KIM plasmid pMT-1, complete sequencehypothetical protein8e-66248
NC_007941:11319:304403044030811372Escherichia coli UTI89 plasmid pUTI89, complete sequencehypothetical protein4e-57219
NC_007941:11319:158091580916204396Escherichia coli UTI89 plasmid pUTI89, complete sequencehypothetical protein6e-57219
NC_017328:3088907:311431231143123114563252Shigella flexneri 2002017 chromosome, complete genomehypothetical protein2e-37154
NC_017328:1075535:109358310935831093834252Shigella flexneri 2002017 chromosome, complete genomehypothetical protein2e-37154
NC_004337:3049118:307452130745213074772252Shigella flexneri 2a str. 301, complete genomehypothetical protein2e-37154
NC_007414:56508:883428834288845504Escherichia coli O157:H7 EDL933 plasmid pO157, complete sequencehypothetical protein1e-0755.1