Pre_GI: BLASTP Hits

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Query: NC_002506:324552:347308 Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete

Start: 347308, End: 348015, Length: 708

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012667:931390:101370610137061014413708Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein8e-138489
NC_012583:361241:366872366872367579708Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein8e-138489
NC_009456:787322:896363896363897070708Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein8e-138489
NC_016446:49618:723837238373081699Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein4e-136483
NC_016945:324519:347167347167347832666Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein4e-129460
NC_008738:1:105361053611198663Marinobacter aquaeolei VT8 plasmid pMAQU01, complete sequencehypothetical protein2e-45182
NC_009441:4328035:432889743288974329676780Flavobacterium johnsoniae UW101 chromosome, complete genomehypothetical protein2e-28126
NC_008700:1627401:163908816390881639849762Shewanella amazonensis SB2B, complete genomeconserved hypothetical protein4e-24111