Pre_GI: BLASTP Hits

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Query: NC_002506:324552:345853 Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete

Start: 345853, End: 346419, Length: 567

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012667:931390:101530210153021015868567Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein3e-100363
NC_009456:787322:897959897959898525567Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein3e-100363
NC_016446:49618:709647096471485522Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein9e-99358
NC_012583:361241:365498365498365983486Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein7e-91332
NC_016945:324519:345763345763346236474Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein2e-88324
NC_006371:1411335:143920014392001439673474Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical protein6e-57219
NC_015424:1987964:200104620010462001519474Aeromonas veronii B565 chromosome, complete genomehypothetical protein3e-49194
NC_013174:309943:342823342823343344522Jonesia denitrificans DSM 20603, complete genomeprotein of unknown function UPF01576e-0753.9