Pre_GI: BLASTP Hits

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Query: NC_002505:168532:177861 Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete

Start: 177861, End: 178424, Length: 564

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016445:2593800:260312926031292603692564Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein7e-105379
NC_016944:168530:177871177871178422552Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein4e-102370
NC_008322:4611000:461939646193964619923528Shewanella sp. MR-7, complete genomehypothetical protein3e-34144
NC_004459:3243987:326487532648753265363489Vibrio vulnificus CMCP6 chromosome I, complete sequenceResponse regulator5e-29127
NC_010506:4873487:488827648882764888803528Shewanella woodyi ATCC 51908, complete genomehypothetical protein9e-1269.7
NC_009901:2272206:229998022999802300519540Shewanella pealeana ATCC 700345, complete genomeconserved hypothetical protein5e-1167.4
NC_009901:4216206:422533642253364225875540Shewanella pealeana ATCC 700345, complete genomeconserved hypothetical protein5e-1167.4
NC_010334:609636:627047627047627586540Shewanella halifaxensis HAW-EB4, complete genomehypothetical protein1e-1066.2
NC_016901:5130147:515206651520665152608543Shewanella baltica OS678 chromosome, complete genomehypothetical protein7e-0960.1
NC_009665:5072413:509431750943175094859543Shewanella baltica OS185 chromosome, complete genomehypothetical protein7e-0960.1
NC_009997:5188221:521144452114445211986543Shewanella baltica OS195, complete genomehypothetical protein7e-0960.1
NC_011663:4943179:495705349570534957601549Shewanella baltica OS223 chromosome, complete genomehypothetical protein1e-0550.1