Pre_GI: BLASTP Hits

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Query: NC_001263:2574755:2579664 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 2579664, End: 2583167, Length: 3504

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014958:629459:6435426435426468353294Deinococcus maricopensis DSM 21211 chromosome, complete genomeS-layer domain-containing protein0753
NC_012526:2483000:2487257248725724898992643Deinococcus deserti VCD115, complete genomeputative S-layer protein, precursor3e-85317
NC_008025:316302:3307673307673336072841Deinococcus geothermalis DSM 11300, complete genomeS-layer-like protein region2e-83311
NC_015161:84526:1005331005331033102778Deinococcus proteolyticus MRP chromosome, complete genomeS-layer domain-containing protein3e-49198
NC_014221:38000:3820538205411052901Truepera radiovictrix DSM 17093 chromosome, complete genomeS-layer domain protein3e-20101
NC_015161:927152:9383999383999396371239Deinococcus proteolyticus MRP chromosome, complete genomeS-layer domain-containing protein2e-1999
NC_015499:119200:1532301532301548401611Thermodesulfobium narugense DSM 14796 chromosome, complete genomeS-layer domain-containing protein5e-1584.3
NC_015499:119200:1510991510991527421644Thermodesulfobium narugense DSM 14796 chromosome, complete genomeS-layer domain-containing protein5e-1584.3
NC_015499:119200:1411261411261427001575Thermodesulfobium narugense DSM 14796 chromosome, complete genomeS-layer domain-containing protein6e-1584
NC_015499:1493500:1495490149549014971211632Thermodesulfobium narugense DSM 14796 chromosome, complete genomeS-layer domain-containing protein9e-1583.6
NC_014654:454633:4918394918394936471809Halanaerobium sp. 'sapolanicus' chromosome, complete genomeS-layer domain-containing protein1e-1276.6
NC_019748:4129500:4148289414828941505202232Stanieria cyanosphaera PCC 7437, complete genomecyanobacterial porin1e-1276.3
NC_009616:183772:1878441878441888751032Thermosipho melanesiensis BI429 chromosome, complete genomeS-layer domain-containing protein3e-1274.7
NC_019978:2396000:2416970241697024186611692Halobacteroides halobius DSM 5150, complete genomeputative S-layer protein3e-1172
NC_006576:2610565:2612515261251526142241710Synechococcus elongatus PCC 6301, complete genomeprobable porin2e-1069.3
NC_007604:1512709:1515369151536915170001632Synechococcus elongatus PCC 7942, complete genomeprobable porin4e-1068.2
NC_008312:6869160:6886447688644768881651719Trichodesmium erythraeum IMS101, complete genomeCarbohydrate-selective porin OprB4e-1068.2
NC_007604:1512709:1517237151723715188321596Synechococcus elongatus PCC 7942, complete genomeprobable porin6e-1067.4
NC_006576:2610565:2614449261444926160561608Synechococcus elongatus PCC 6301, complete genomeprobable porin9e-1067
NC_000911:3436529:3454422345442234560561635Synechocystis sp. PCC 6803, complete genomehypothetical protein3e-0965.5
NC_017039:3433173:3451066345106634527001635Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein3e-0965.5
NC_017052:3433162:3451055345105534526891635Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein3e-0965.5
NC_017277:3434162:3452055345205534536891635Synechocystis sp. PCC 6803, complete genomehypothetical protein3e-0965.5
NC_014248:4642149:4655860465586046574491590Nostoc azollae 0708 chromosome, complete genomecarbohydrate-selective porin OprB2e-0965.5
NC_008312:6869160:6889357688935768908321476Trichodesmium erythraeum IMS101, complete genomeCarbohydrate-selective porin OprB3e-0862
NC_016077:1876119:1890260189026018956355376Acidaminococcus intestini RyC-MR95 chromosome, complete genomeS-layer protein2e-0759.3
NC_007513:1900000:1905017190501719065911575Synechococcus sp. CC9902, complete genomepossible porin2e-0758.9
NC_008319:1376938:1381029138102913826031575Synechococcus sp. CC9311, complete genomepossible porin3e-0758.5
NC_013520:1905554:1905554190555419080522499Veillonella parvula DSM 2008, complete genomeS-layer domain protein6e-0757.8
NC_007516:1439537:1445936144593614474801545Synechococcus sp. CC9605, complete genomepossible porin5e-0757.8
NC_008319:1376938:1382769138276913843821614Synechococcus sp. CC9311, complete genomepossible porin5e-0757.8
NC_015873:2294312:2302112230211223034491338Megasphaera elsdenii DSM 20460, complete genomehypothetical protein5e-0757.8
NC_008319:635157:6400576400576417631707Synechococcus sp. CC9311, complete genomepossible porin4e-0757.8
NC_007513:1900000:1915898191589819174541557Synechococcus sp. CC9902, complete genomepossible porin4e-0757.8
NC_013740:1218429:1272900127290012791036204Acidaminococcus fermentans DSM 20731, complete genomeS-layer domain protein6e-0757.4
NC_007516:774489:8019518019518035851635Synechococcus sp. CC9605, complete genomepossible porin6e-0757.4
NC_007516:1439537:1461868146186814634541587Synechococcus sp. CC9605, complete genomepossible porin8e-0757
NC_016077:1876119:1896260189626018979661707Acidaminococcus intestini RyC-MR95 chromosome, complete genomeputative S-layer y domain-containing protein2e-0655.8