Pre_GI: BLASTP Hits

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Query: NC_001263:2461941:2460805 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 2460805, End: 2461944, Length: 1140

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010552:2131021:2143029214302921441561128Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceaminotransferase class V2e-140498
NC_010501:3448389:3472052347205234731851134Pseudomonas putida W619, complete genomeserine-pyruvate transaminase9e-135480
NC_020911:1549065:1549065154906515501981134Octadecabacter antarcticus 307, complete genomehypothetical protein1e-131469
NC_010524:4644587:4648152464815246492791128Leptothrix cholodnii SP-6, complete genomeserine-pyruvate aminotransferase4e-130464
NC_015859:1536439:1539106153910615402451140Corynebacterium variabile DSM 44702 chromosome, complete genomeserine-pyruvate aminotransferase4e-119427
NC_010545:11950:5064850648517781131Corynebacterium urealyticum DSM 7109, complete genomeserine-pyruvate aminotransferase4e-109394
NC_015435:1180455:1181379118137911825301152Metallosphaera cuprina Ar-4 chromosome, complete genomeaminotransferase, class V3e-26119
NC_017277:1957399:1972428197242819735821155Synechocystis sp. PCC 6803, complete genomehydrogenase small subunit8e-1581.6
NC_017052:1957598:1972627197262719737811155Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehydrogenase small subunit8e-1581.6
NC_017039:1957610:1972639197263919737931155Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehydrogenase small subunit8e-1581.6
NC_000911:1957758:1973611197361119747651155Synechocystis sp. PCC 6803, complete genomesoluble hydrogenase 42 kD subunit8e-1581.6
NC_015948:2421933:2427607242760724287881182Haloarcula hispanica ATCC 33960 chromosome chromosome I, completeclass V aminotransferase3e-1480.1
NC_019974:1689486:1694556169455616957581203Natronococcus occultus SP4, complete genomeserine-pyruvate aminotransferase/archaeal aspartate aminotransferase5e-1479
NC_011653:331986:3462563462563473981143Thermosipho africanus TCF52B, complete genomesoluble hydrogenase 42 kDa subunit1e-1377.4
NC_019962:2189432:2208089220808922093001212Natrinema pellirubrum DSM 15624, complete genomeserine-pyruvate aminotransferase/archaeal aspartate aminotransferase2e-1377.4
NC_009616:99647:1126741126741138161143Thermosipho melanesiensis BI429 chromosome, complete genomeclass V aminotransferase2e-1377
NC_019792:3735654:3754060375406037552621203Natronobacterium gregoryi SP2 chromosome, complete genomeserine-pyruvate aminotransferase/archaeal aspartate aminotransferase7e-1375.1
NC_013922:21000:2197221972231861215Natrialba magadii ATCC 43099 chromosome, complete genomeaminotransferase class V3e-1273.6
NC_012029:1759291:1782439178243917836051167Halorubrum lacusprofundi ATCC 49239 chromosome 1, complete genomeaminotransferase class V1e-1170.9
NC_007519:3391090:3413313341331334144881176Desulfovibrio alaskensis G20 chromosome, complete genomeclass V aminotransferase4e-1169.7
NC_015555:2359000:2365391236539123664761086Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeSerine--pyruvate transaminase4e-1169.3
NC_007644:3229:1888718887200531167Moorella thermoacetica ATCC 39073, complete genomeSerine--glyoxylate transaminase8e-1168.6
NC_013943:2547966:2553507255350725546551149Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomeclass V aminotransferase9e-1168.2
NC_007406:2615916:2635754263575426370011248Nitrobacter winogradskyi Nb-255, complete genomeaminotransferase, class V3e-1066.6
NC_006834:1414113:1428825142882514299791155Xanthomonas oryzae pv. oryzae KACC10331, complete genomehypothetical protein3e-1066.6
NC_019892:7822000:7844258784425878454151158Singulisphaera acidiphila DSM 18658 chromosome, complete genomeserine-pyruvate aminotransferase/archaeal aspartate aminotransferase3e-1066.2
NC_014328:85290:8803488034891041071Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative aminotransferase5e-1065.9
NC_011313:871445:8899128899128910421131Aliivibrio salmonicida LFI1238 chromosome 2, complete sequence2-aminoethylphosphonate--pyruvate transaminase5e-1065.9
NC_007705:1388607:1403211140321114043651155Xanthomonas oryzae pv. oryzae MAFF 311018, complete genomeputative serine-pyruvate aminotransferase8e-1065.1
NC_014220:2398334:1046510465116281164Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeaminotransferase class V9e-1065.1
NC_014150:3053859:3054682305468230558271146Brachyspira murdochii DSM 12563 chromosome, complete genomeaminotransferase class V1e-0964.3
NC_013790:583474:5852865852865864521167Methanobrevibacter ruminantium M1 chromosome, complete genomeaminotransferase class V family3e-0963.2
NC_014410:2609588:2617848261784826189331086Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,aminotransferase class V5e-0962.8
NC_013722:2810721:2820870282087028220241155Xanthomonas albilineans, complete genomeputative serine-pyruvate aminotransferase protein9e-0961.6
NC_011983:760113:7688037688037699361134Agrobacterium radiobacter K84 chromosome 2, complete genome2-aminoethylphosphonate--pyruvate transaminase1e-0861.2
NC_014364:815346:8262268262268273441119Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeaminotransferase class V2e-0860.8
NC_018644:1263891:1279776127977612809361161Alpha proteobacterium HIMB59 chromosome, complete genomeAminotransferase class-V1e-0860.8
NC_019978:7535:2280222802239681167Halobacteroides halobius DSM 5150, complete genomeserine-pyruvate aminotransferase/archaeal aspartate aminotransferase3e-0859.7
NC_014253:1010949:1019218101921810203691152Methanohalobium evestigatum Z-7303 chromosome, complete genomeclass V aminotransferase7e-0858.5
NC_010674:3619722:3637023363702336380991077Clostridium botulinum B str. Eklund 17B, complete genomeserine--glyoxylate aminotransferase1e-0758.2
NC_018000:1852691:1870159187015918713491191Sinorhizobium fredii USDA 257 chromosome, complete genomeserine--glyoxylate aminotransferase SgaA1e-0757.8
NC_010002:3357752:3357752335775233589931242Delftia acidovorans SPH-1, complete genomeSerine--glyoxylate transaminase2e-0757
NC_016629:415711:4256774256774268611185Desulfovibrio africanus str. Walvis Bay chromosome, completeserine--glyoxylate transaminase3e-0756.6
NC_015425:2690448:2713657271365727147991143Clostridium botulinum BKT015925 chromosome, complete genomeserine--pyruvate transaminase5e-0755.8
NC_014002:1129349:1144969114496911461141146Methanohalophilus mahii DSM 5219 chromosome, complete genomeaminotransferase class V1e-0654.3
NC_017275:1248875:1266624126662412677451122Sulfolobus islandicus HVE10/4 chromosome, complete genomeserine--pyruvate transaminase2e-0654.3