Pre_GI: BLASTP Hits

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Query: NC_000919:107373:120344 Treponema pallidum subsp. pallidum str. Nichols, complete genome

Start: 120344, End: 121921, Length: 1578

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was originally isolated in 1912 from a neurosyphilitic patient and is virulent. This organism is the causative agent of endemic and venereal syphilis. This sexual transmitted disease was first discovered in Europe at the end of the fifteenth century, however, the causative agent was not identified until 1905. At one time syphilis was the third most commonly reported communicable disease in the USA. Syphilis is characterized by multiple clinical stages and long periods of latent, asymptomatic infection. Although effective therapies have been available since the introduction of penicillin, syphilis remains a global health problem. This organisms is divided into subspecies each of which causes a specific disease. T. pallidum causes the venereal disease syphilis. T. pertenue, T. carateum and T. endemicum cause the skin infections yaws, pinta and bejel, respectively.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017268:107387:1203581203581221691812Treponema pallidum subsp. pallidum str. Chicago chromosome,LicC protein01105
NC_016844:107382:1203531203531220441692Treponema pallidum subsp. pallidum DAL-1 chromosome, completeputative bifunctional choline-phosphate cytidylyltransferase/choline kinase01103
NC_021508:107384:1203551203551219321578Treponema pallidum subsp. pallidum SS14, complete genomebifunctional choline-phosphatase cytidyltransferase/choline kinase01103
NC_010741:107370:1203411203411219181578Treponema pallidum subsp. pallidum SS14, complete genomeprotein LicC01103
NC_013204:2826500:2850273285027328520601788Eggerthella lenta DSM 2243, complete genomeCholine/ethanolamine kinase8e-101367
NC_012780:430653:4459614459614477301770Eubacterium eligens ATCC 27750 plasmid unnamed, complete sequencecholine kinase / choline-phosphate cytidylyltransferase8e-97354
NC_014363:645397:6721736721736739871815Olsenella uli DSM 7084 chromosome, complete genomeCholine/ethanolamine kinase3e-93342
NC_013204:2371499:2373994237399423757631770Eggerthella lenta DSM 2243, complete genomeaminoglycoside phosphotransferase2e-90333
NC_003454:1889529:1893543189354318951471605Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeCholine kinase3e-80300
NC_015738:978794:1024785102478510265751791Eggerthella sp. YY7918, complete genomehypothetical protein3e-76286
NC_013165:1407000:1426686142668614284971812Slackia heliotrinireducens DSM 20476, complete genomeCTP:phosphocholine cytidylyltransferase5e-60232
NC_009922:2556033:257972025797202580634915Alkaliphilus oremlandii OhILAs, complete genomeCholine/ethanolamine kinase1e-30134
NC_009633:3933941:395477039547703955687918Alkaliphilus metalliredigens QYMF chromosome, complete genomecholine/ethanolamine kinase2e-28127
NC_014363:645397:663757663757664464708Olsenella uli DSM 7084 chromosome, complete genomecholine kinase6e-28125
NC_014328:4316008:431600843160084316943936Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative choline kinase9e-27122
NC_012780:430653:445241445241445960720Eubacterium eligens ATCC 27750 plasmid unnamed, complete sequencecholine kinase / choline-phosphate cytidylyltransferase6e-26119
NC_016584:5625975:564571056457105646624915Desulfosporosinus orientis DSM 765 chromosome, complete genomecholine kinase2e-25117
NC_015589:2100175:210275721027572103671915Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeCholine/ethanolamine kinase4e-25116
NC_010723:3133302:3133302313330231351611860Clostridium botulinum E3 str. Alaska E43, complete genomecholine/ethanolamine kinase family protein2e-24114
NC_013204:2371499:237594123759412376843903Eggerthella lenta DSM 2243, complete genomeCTP:phosphocholine cytidylyltransferase-like protein1e-22108
NC_012913:2189862:220225422022542203171918Aggregatibacter aphrophilus NJ8700, complete genomecholine kinase4e-21103
NC_014152:1:269532695327909957Thermincola sp. JR, complete genomeCholine/ethanolamine kinase3e-1790.5
NC_012913:2189862:220067322006732201392720Aggregatibacter aphrophilus NJ8700, complete genomeLicC protein2e-1584
NC_018870:705900:7148797148797159071029Thermacetogenium phaeum DSM 12270 chromosome, complete genomecholine/ethanolamine kinase3e-1480.5
NC_014484:1690272:1699910169991017017691860Spirochaeta thermophila DSM 6192 chromosome, complete genomeaminotransferase, class V6e-1169.7
NC_006347:2154906:215618221561822156901720Bacteroides fragilis YCH46, complete genomeputative glucose-1-P-cytidylyltransferase2e-0964.7
NC_015732:1507473:1507473150747315093051833Spirochaeta caldaria DSM 7334 chromosome, complete genome2-aminoethylphosphonate aminotransferase3e-0963.9
NC_019942:686564:697284697284698021738Aciduliprofundum sp. MAR08-339, complete genomeputative sugar nucleotidyltransferase7e-0859.3
NC_014484:1690272:1702878170287817044731596Spirochaeta thermophila DSM 6192 chromosome, complete genomehypothetical protein8e-0859.3
NC_015676:1736375:1771424177142417726321209Methanosalsum zhilinae DSM 4017 chromosome, complete genomeNucleotidyl transferase2e-0758.2
NC_013922:938091:938091938091938828738Natrialba magadii ATCC 43099 chromosome, complete genomeNucleotidyl transferase2e-0758.2
NC_010525:421769:448297448297448989693Thermoproteus neutrophilus V24Sta, complete genomeNucleotidyl transferase2e-0758.2
NC_007681:1455425:1465432146543214667271296Methanosphaera stadtmanae DSM 3091, complete genomepredicted nucleoside-diphosphate-sugar pyrophosphorylase2e-0757.8
NC_000961:1481685:1491115149111514922001086Pyrococcus horikoshii OT3, complete genomemannose-1-phosphate guanyltransferase2e-0757.4
NC_005070:419261:4553124553124563701059Synechococcus sp. WH 8102, complete genomeputative sugar-phosphate nucleotide transferase2e-0757.4
NC_019792:2173865:217585921758592176608750Natronobacterium gregoryi SP2 chromosome, complete genomedTDP-glucose pyrophosphorylase4e-0756.6
NC_001264:28266:3347433474345591086Deinococcus radiodurans R1 chromosome 2, complete sequenceglucose-1-phosphate thymidylyltransferase, putative5e-0756.6
NC_014160:539347:5393475393475404141068Thermosphaera aggregans DSM 11486 chromosome, complete genomeglucose-1-phosphate thymidyltransferase6e-0756.2
NC_009515:616432:6351786351786364671290Methanobrevibacter smithii ATCC 35061, complete genomeglucose-1-phosphate thymidylyltransferase6e-0756.2
NC_014964:557910:5579105579105602402331Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeNucleotidyl transferase6e-0756.2
NC_007796:3116293:3136757313675731379231167Methanospirillum hungatei JF-1, complete genomeNucleotidyl transferase6e-0756.2
NC_010321:562494:5624945624945648242331Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completenucleotidyl transferase6e-0756.2
NC_019962:960831:966515966515967246732Natrinema pellirubrum DSM 15624, complete genomedTDP-glucose pyrophosphorylase5e-0756.2
NC_013743:3020687:302416930241693024915747Haloterrigena turkmenica DSM 5511, complete genomeNucleotidyl transferase7e-0755.8
NC_017192:1028866:103283110328311033577747Arcobacter sp. L, complete genomehypothetical protein8e-0755.8
NC_013158:1085937:111372411137241114467744Halorhabdus utahensis DSM 12940, complete genomeNucleotidyl transferase1e-0655.5
NC_014376:3732547:3743785374378537449991215Clostridium saccharolyticum WM1 chromosome, complete genomehistidinol-phosphate phosphatase family protein2e-0654.3
NC_008212:2865737:288519628851962885951756Haloquadratum walsbyi DSM 16790, complete genomesugar nucleotidyltransferase II (probable glucose-1-phosphate thymidylyltransferase)3e-0653.9
NC_014735:199434:219732219732220463732Halogeometricum borinquense DSM 11551 plasmid pHBOR01, completedTDP-glucose pyrophosphorylase4e-0653.5
NC_019974:2889375:291015929101592910893735Natronococcus occultus SP4, complete genomedTDP-glucose pyrophosphorylase4e-0653.5
NC_003106:922773:943087943087943773687Sulfolobus tokodaii str. 7, complete genomehypothetical GDP-mannose pyrophosphorylase5e-0653.1
NC_002607:3322:409914099141719729Halobacterium sp. NRC-1, complete genomedTDP-glucose pyrophosphorylase6e-0652.8
NC_010364:3322:420064200642734729Halobacterium salinarum R1, complete genomesugar nucleotidyltransferase6e-0652.8