Pre_GI: BLASTP Hits

Some Help

Query: AP010958:3669500:3713595 Escherichia coli O103:H2 str. 12009 DNA, complete genome

Start: 3713595, End: 3714470, Length: 876

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013353:3669500:371359537135953714470876Escherichia coli O103:H2 str. 12009, complete genomeT3SS effector OspB-homolog1e-163575
NC_013716:357928:364176364176365051876Citrobacter rodentium ICC168, complete genomeT3SS effector protein EspS4e-108390
NC_013361:5319497:532970953297095330287579Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS effector OspB6e-102370
NC_004605:1385444:145309314530931453980888Vibrio parahaemolyticus RIMD 2210633 chromosome II, completeputative OspB protein7e-35147
NC_011147:1239904:125073912507391251623885Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein9e-34144
NC_006511:1243817:125689612568961257780885Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein9e-34144