Pre_GI: SWBIT SVG BLASTP

Query: NC_007794:2839239 Novosphingobium aromaticivorans DSM 12444, complete genome

Lineage: Novosphingobium aromaticivorans; Novosphingobium; Sphingomonadaceae; Sphingomonadales; Proteobacteria; Bacteria

General Information: This strain, also known as F199, was isolated from a sample obtained at a depth of 410 m from a borehole sample that was drilled at the Savannah River Site in South Carolina, USA. Aromatic hydrocarbon-degrading bacterium. This organism is unusual in that it has glycosphingolipid in the cell envelope instead of the lipopolysaccharide found in most other gram negative organisms. It is typically isolated from a wide range of environmental sites.

- Sequence; - BLASTP hit: hover for score (Low score = Light, High score = Dark);
- hypothetical protein; - cds: hover for description

BLASTP Alignment.txt

Subject: NC_008146:1535827 Mycobacterium sp. MCS, complete genome

Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.