Pre_GI: OUP Neighbours

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Query: NC_011750:2009889 Escherichia coli IAI39 chromosome, complete genome

D: 39.0625

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli IAI39 is a serotype O7:K1 strain from a urinary tract infection. Isolated from the urine of a patient with pyelonephritis in the 1980s in France. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

Number of Neighbours: 44




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_013716:4824541*Citrobacter rodentium ICC168, complete genome76.2469 %Subject ←→ Query38.2235
NC_014500:2616423Dickeya dadantii 3937 chromosome, complete genome76.7249 %Subject ←→ Query29.9702
NC_013592:1424560Dickeya dadantii Ech586, complete genome75.6373 %Subject ←→ Query41.2418
NC_013592:2160000Dickeya dadantii Ech586, complete genome76.9393 %Subject ←→ Query33.4874
NC_012912:2285778Dickeya zeae Ech1591, complete genome75.6587 %Subject ←→ Query33.4887
NC_012779:2281700*Edwardsiella ictaluri 93-146, complete genome77.0527 %Subject ←→ Query40.1776
NC_012779:3316877Edwardsiella ictaluri 93-146, complete genome75.4718 %Subject ←→ Query34.9445
NC_012779:3176820*Edwardsiella ictaluri 93-146, complete genome75.0276 %Subject ←→ Query39.7546
NC_012779:305969Edwardsiella ictaluri 93-146, complete genome76.8781 %Subject ←→ Query39.836
NC_012779:2928000*Edwardsiella ictaluri 93-146, complete genome76.7555 %Subject ←→ Query41.5453
NC_014121:1822895Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete82.1385 %Subject ←→ Query40.59
NC_014304:77715Erwinia billingiae Eb661 plasmid pEB102, complete sequence75.1746 %Subject ←→ Query34.3324
NC_014305:126029Erwinia billingiae Eb661 plasmid pEB170, complete sequence77.7911 %Subject ←→ Query35.5879
NC_008563:3119284Escherichia coli APEC O1, complete genome79.9663 %Subject ←→ Query31.9127
NC_004431:1352906Escherichia coli CFT073, complete genome80.0888 %Subject ←→ Query36.4239
NC_011750:919953Escherichia coli IAI39 chromosome, complete genome78.2445 %Subject ←→ Query38.6045
NC_011750:1931384Escherichia coli IAI39 chromosome, complete genome81.0692 %Subject ←→ Query37.6581
AP010958:1472506Escherichia coli O103:H2 str. 12009 DNA, complete genome80.0153 %Subject ←→ Query36.7127
NC_002655:1909139Escherichia coli O157:H7 EDL933, complete genome78.7898 %Subject ←→ Query38.4667
NC_002695:2893951Escherichia coli O157:H7 str. Sakai, complete genome80.7322 %Subject ←→ Query37.275
NC_002695:2158314Escherichia coli O157:H7 str. Sakai, complete genome80.0797 %Subject ←→ Query36.4725
NC_011751:1377457Escherichia coli UMN026 chromosome, complete genome80.6587 %Subject ←→ Query36.813
NC_009648:3720000*Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome75.1532 %Subject ←→ Query36.7036
NC_009648:3476000Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome78.8542 %Subject ←→ Query37.4593
NC_009648:2465613*Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome75.0643 %Subject Query50.7802
NC_009648:1487692Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome76.8321 %Subject Query49.6231
NC_013956:4579759Pantoea ananatis LMG 20103 chromosome, complete genome82.7328 %Subject ←→ Query34.8158
NC_014562:1935088Pantoea vagans C9-1 chromosome, complete genome75.1501 %Subject ←→ Query30.3988
NC_014561:153143Pantoea vagans C9-1 plasmid pPag1, complete sequence75.8854 %Subject Query28.1767
NC_011149:2294500Salmonella enterica subsp. enterica serovar Agona str. SL483,75.6801 %Subject ←→ Query38.0253
NC_006905:2355290Salmonella enterica subsp. enterica serovar Choleraesuis str77.4694 %Subject ←→ Query37.6094
NC_011080:2342672Salmonella enterica subsp. enterica serovar Newport str. SL254,77.4203 %Subject ←→ Query37.4165
NC_006511:682863*Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC75.3523 %Subject ←→ Query36.3874
NC_003198:2297837Salmonella enterica subsp. enterica serovar Typhi str. CT18,77.5184 %Subject ←→ Query37.159
NC_004631:685357*Salmonella enterica subsp. enterica serovar Typhi Ty2, complete79.1391 %Subject ←→ Query36.1113
NC_003277:22257Salmonella typhimurium LT2 plasmid pSLT, complete sequence76.7371 %Subject ←→ Query31.1132
NC_009832:358291Serratia proteamaculans 568, complete genome79.1085 %Subject ←→ Query31.5844
NC_009832:1946401Serratia proteamaculans 568, complete genome80.1195 %Subject ←→ Query35.908
NC_015566:316340Serratia sp. AS12 chromosome, complete genome78.223 %Subject ←→ Query34.9699
NC_015567:313035Serratia sp. AS9 chromosome, complete genome77.2978 %Subject ←→ Query32.0282
NC_010660:175200*Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence76.6054 %Subject ←→ Query46.3542
NC_007608:97092Shigella boydii Sb227 plasmid pSB4_227, complete sequence75.242 %Subject ←→ Query36.3239
NC_007385:157516Shigella sonnei Ss046 plasmid pSS_046, complete sequence81.2684 %Subject ←→ Query38.0958
NC_014228:3282500Xenorhabdus nematophila ATCC 19061, complete genome75.3217 %Subject ←→ Query41.4806