Query: NC_006155:4105542 Yersinia pseudotuberculosis IP 32953, complete genome
D: 34.268
Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria
General Information: This strain is a fully virulent serotype I strain isolated from a human patient. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.
Number of Neighbours: 25
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Subject Host Description |
Compositional Similarity |
Proposed Island Flow | Subject Island D |
---|
NC_010465:429095 | Yersinia pseudotuberculosis YPIII, complete genome | 76.3021 % | Subject ←→ Query | 29.1646 |
NC_005810:4469156 | Yersinia pestis biovar Microtus str. 91001, complete genome | 76.6789 % | Subject ←→ Query | 29.5112 |
NC_003143:4006884 | Yersinia pestis CO92, complete genome | 76.7279 % | Subject ←→ Query | 29.6176 |
NC_008149:4053363 | Yersinia pestis Nepal516, complete genome | 77.3315 % | Subject ←→ Query | 30.0006 |
NC_004088:266543 | Yersinia pestis KIM, complete genome | 77.1569 % | Subject ←→ Query | 30.0081 |
NC_006155:4302826 | Yersinia pseudotuberculosis IP 32953, complete genome | 77.1324 % | Subject ←→ Query | 30.1556 |
NC_003143:2778494 | Yersinia pestis CO92, complete genome | 83.0331 % | Subject ←→ Query | 30.2293 |
NC_010634:4234932 | Yersinia pseudotuberculosis PB1/+, complete genome | 77.6777 % | Subject ←→ Query | 30.3016 |
NC_015663:1902344* | Enterobacter aerogenes KCTC 2190 chromosome, complete genome | 75.671 % | Subject ←→ Query | 31.1284 |
NC_008150:3529430 | Yersinia pestis Antiqua, complete genome | 88.1618 % | Subject ←→ Query | 31.4433 |
NC_012962:3864000* | Photorhabdus asymbiotica, complete genome | 75.3983 % | Subject ←→ Query | 31.492 |
NC_014306:2476316 | Erwinia billingiae Eb661, complete genome | 78.1924 % | Subject ←→ Query | 32.9311 |
NC_004088:3955933 | Yersinia pestis KIM, complete genome | 87.6195 % | Subject ←→ Query | 33.4603 |
NC_010159:1101241 | Yersinia pestis Angola, complete genome | 87.4571 % | Subject ←→ Query | 33.9894 |
NC_010634:4045794 | Yersinia pseudotuberculosis PB1/+, complete genome | 99.7518 % | Subject ←→ Query | 34.0011 |
NC_005810:3238391 | Yersinia pestis biovar Microtus str. 91001, complete genome | 87.4908 % | Subject ←→ Query | 34.2139 |
NC_014562:1883517* | Pantoea vagans C9-1 chromosome, complete genome | 77.7972 % | Subject ←→ Query | 34.2182 |
NC_003143:645559 | Yersinia pestis CO92, complete genome | 87.5184 % | Subject ←→ Query | 34.4007 |
NC_013421:2720500 | Pectobacterium wasabiae WPP163, complete genome | 78.318 % | Subject ←→ Query | 34.6251 |
NC_014228:2883500 | Xenorhabdus nematophila ATCC 19061, complete genome | 75.3125 % | Subject ←→ Query | 39.0811 |
NC_012779:3176820* | Edwardsiella ictaluri 93-146, complete genome | 75.7966 % | Subject ←→ Query | 39.7546 |
NC_014228:3282500 | Xenorhabdus nematophila ATCC 19061, complete genome | 75.5821 % | Subject ←→ Query | 41.4806 |
NC_015566:4662171 | Serratia sp. AS12 chromosome, complete genome | 77.3805 % | Subject ←→ Query | 41.8855 |
NC_013283:113660 | Cronobacter turicensis plasmid pCTU1, complete sequence | 77.4479 % | Subject ←→ Query | 42.151 |
NC_005126:589000 | Photorhabdus luminescens subsp. laumondii TTO1, complete genome | 75.0214 % | Subject ←→ Query | 42.3176 |