Pre_GI: OUP Neighbours

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Query: CU928160:256932 Escherichia coli IAI1 chromosome, complete genome

D: 34.5956

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

Number of Neighbours: 22

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Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_015737:2050219Clostridium sp. SY8519, complete genome76.0478 %Subject ←→ Query32.545
NC_014121:1822895Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete76.5043 %Subject ←→ Query40.59
NC_009778:3832000Enterobacter sakazakii ATCC BAA-894, complete genome77.5061 %Subject Query45.4902
NC_013961:3083816Erwinia amylovora, complete genome78.1036 %Subject ←→ Query36.2172
NC_008563:3119284Escherichia coli APEC O1, complete genome81.2377 %Subject ←→ Query31.9127
NC_004431:1352906Escherichia coli CFT073, complete genome79.1544 %Subject ←→ Query36.4239
NC_009801:3374501*Escherichia coli E24377A, complete genome76.4185 %Subject ←→ Query36.3653
NC_011750:1931384Escherichia coli IAI39 chromosome, complete genome77.6226 %Subject ←→ Query37.6581
NC_011750:919953Escherichia coli IAI39 chromosome, complete genome75.864 %Subject ←→ Query38.6045
AP010958:1472506Escherichia coli O103:H2 str. 12009 DNA, complete genome80.9988 %Subject ←→ Query36.7127
NC_002655:1909139Escherichia coli O157:H7 EDL933, complete genome78.701 %Subject ←→ Query38.4667
NC_002695:2893951Escherichia coli O157:H7 str. Sakai, complete genome76.6176 %Subject ←→ Query37.275
NC_002695:2158314Escherichia coli O157:H7 str. Sakai, complete genome78.5631 %Subject ←→ Query36.4725
NC_011751:1377457Escherichia coli UMN026 chromosome, complete genome78.5417 %Subject ←→ Query36.813
NC_009648:3476000Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome78.4283 %Subject ←→ Query37.4593
NC_009648:2465613*Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome77.1201 %Subject Query50.7802
NC_009648:1487692Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome75.3462 %Subject Query49.6231
NC_007608:97092Shigella boydii Sb227 plasmid pSB4_227, complete sequence75.6005 %Subject ←→ Query36.3239
NC_007384:1763375Shigella sonnei Ss046, complete genome85.9252 %Subject ←→ Query33.4012
NC_005810:4469156Yersinia pestis biovar Microtus str. 91001, complete genome75.9314 %Subject ←→ Query29.5112
NC_004088:266543Yersinia pestis KIM, complete genome76.0233 %Subject ←→ Query30.0081
NC_008149:4053363Yersinia pestis Nepal516, complete genome76.2224 %Subject ←→ Query30.0006