Pre_GI: OUP Neighbours

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Query: NC_017262:623351 Zymomonas mobilis subsp. mobilis ATCC 10988 chromosome, complete

D: 31.8296

Host Lineage: Zymomonas mobilis; Zymomonas; Sphingomonadaceae; Sphingomonadales; Proteobacteria; Bacteria

General Information: Country: Mexico; Environment: Food; Isolation: Fermenting Agave juice; Isolation: originally isolated as Pseudomonas lindneri; Temp: Mesophile; Temp: 30C. The natural habitat of this organism includes sugar-rich plant saps where the bacterium ferments sugar to ethanol. The high conversion of sugars to ethanol makes this organism useful in industrial production systems, particularly in production of bioethanol for fuel. A recombinant strain of this bacterium is utilized for the conversion of sugars, particularly xylose, which is not utilized by another common sugar-fermenting organism such as yeast, to ethanol. Since xylose is a common breakdown product of cellulose or a waste component of the agricultural industry, it is an attractive source for ethanol production. Zymomonas mobilis was chosen for this process as it is ethanol-tolerant (up to 120 grams of ethanol per litre) and productive (5-10% more ethanol than Saccharomyces). This bacterium ferments using the Enter-Doudoroff pathway, with the result that less carbon is used in cellular biomass production and more ends up as ethanol, another factor that favors this organism for ethanol production.

Number of Neighbours: 228




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_018145:1089548*Zymomonas mobilis subsp. mobilis ATCC 29191 chromosome, complete82.5 %Subject ←→ Query22.7322
NC_018145:50237Zymomonas mobilis subsp. mobilis ATCC 29191 chromosome, complete86.4369 %Subject ←→ Query24.0769
NC_009441:3522519*Flavobacterium johnsoniae UW101 chromosome, complete genome76.1642 %Subject ←→ Query25.0902
NC_018145:683874*Zymomonas mobilis subsp. mobilis ATCC 29191 chromosome, complete84.3873 %Subject ←→ Query25.3709
NC_006526:256658Zymomonas mobilis subsp. mobilis ZM4, complete genome79.9449 %Subject ←→ Query25.6303
NC_017262:1913302*Zymomonas mobilis subsp. mobilis ATCC 10988 chromosome, complete83.8511 %Subject ←→ Query25.9275
NC_006526:1303635*Zymomonas mobilis subsp. mobilis ZM4, complete genome86.0692 %Subject ←→ Query26.211
NC_018866:27878Dehalobacter sp. DCA chromosome, complete genome76.9393 %Subject ←→ Query26.3517
NC_013355:1332263Zymomonas mobilis subsp. mobilis NCIB 11163, complete genome86.1152 %Subject ←→ Query26.5686
NC_006526:1202000Zymomonas mobilis subsp. mobilis ZM4, complete genome82.1232 %Subject ←→ Query26.5929
NC_009441:3597020Flavobacterium johnsoniae UW101 chromosome, complete genome75.1409 %Subject ←→ Query27.1431
NC_017262:959028Zymomonas mobilis subsp. mobilis ATCC 10988 chromosome, complete80.481 %Subject ←→ Query27.2161
NC_018867:2354000Dehalobacter sp. CF chromosome, complete genome76.5564 %Subject ←→ Query27.3164
NC_020272:599064*Bacillus amyloliquefaciens IT-45, complete genome77.1078 %Subject ←→ Query27.6842
NC_018866:63498*Dehalobacter sp. DCA chromosome, complete genome77.4142 %Subject ←→ Query27.717
NC_020244:3358399Bacillus subtilis XF-1, complete genome77.7451 %Subject ←→ Query27.8332
NC_016023:875416Bacillus coagulans 36D1 chromosome, complete genome76.25 %Subject ←→ Query28.0678
NC_013355:1087807*Zymomonas mobilis subsp. mobilis NCIB 11163, complete genome79.7028 %Subject ←→ Query28.2344
NC_018145:104303*Zymomonas mobilis subsp. mobilis ATCC 29191 chromosome, complete84.3719 %Subject ←→ Query28.3189
NC_015577:3364985Treponema azotonutricium ZAS-9 chromosome, complete genome76.8137 %Subject ←→ Query28.7605
NC_014650:2969866*Geobacillus sp. Y4.1MC1 chromosome, complete genome75.5423 %Subject ←→ Query28.9698
NC_019842:3921424*Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,75.0214 %Subject ←→ Query29.0066
NC_013355:105500*Zymomonas mobilis subsp. mobilis NCIB 11163, complete genome84.0594 %Subject ←→ Query29.1472
NC_015660:1784553Geobacillus thermoglucosidasius C56-YS93 chromosome, complete75.0153 %Subject ←→ Query29.2862
NC_015577:383071*Treponema azotonutricium ZAS-9 chromosome, complete genome75.9804 %Subject ←→ Query29.4473
NC_015577:3735558Treponema azotonutricium ZAS-9 chromosome, complete genome75.7659 %Subject ←→ Query29.6814
NC_019842:3755275*Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,76.7586 %Subject ←→ Query29.819
NC_018645:4879931Desulfobacula toluolica Tol2, complete genome75.3309 %Subject ←→ Query29.9327
NC_020244:3681236*Bacillus subtilis XF-1, complete genome75.6311 %Subject ←→ Query29.9378
NC_018867:121512Dehalobacter sp. CF chromosome, complete genome76.3909 %Subject ←→ Query30.0725
NC_012108:2975676Desulfobacterium autotrophicum HRM2, complete genome75.1869 %Subject ←→ Query30.2266
NC_017188:3900951*Bacillus amyloliquefaciens TA208 chromosome, complete genome75.3125 %Subject ←→ Query30.2742
NC_012108:1664341Desulfobacterium autotrophicum HRM2, complete genome75.1777 %Subject ←→ Query30.4764
NC_015577:3688071Treponema azotonutricium ZAS-9 chromosome, complete genome76.1213 %Subject ←→ Query30.5052
NC_020272:1384525Bacillus amyloliquefaciens IT-45, complete genome76.4093 %Subject ←→ Query30.5835
NC_011830:1190502*Desulfitobacterium hafniense DCB-2, complete genome75.5882 %Subject ←→ Query30.6359
NC_020210:3341976Geobacillus sp. GHH01, complete genome78.0453 %Subject ←→ Query30.9309
NC_017191:3901914*Bacillus amyloliquefaciens XH7 chromosome, complete genome75.386 %Subject ←→ Query30.9612
NC_016023:1501553Bacillus coagulans 36D1 chromosome, complete genome77.3407 %Subject ←→ Query31.0527
NC_012108:4971086Desulfobacterium autotrophicum HRM2, complete genome75.4841 %Subject ←→ Query31.5092
NC_016023:579000*Bacillus coagulans 36D1 chromosome, complete genome77.3468 %Subject ←→ Query31.7659
NC_015577:3776295Treponema azotonutricium ZAS-9 chromosome, complete genome77.6685 %Subject ←→ Query32.1958
NC_015577:1682970Treponema azotonutricium ZAS-9 chromosome, complete genome75.8333 %Subject ←→ Query32.3208
NC_015634:2933712Bacillus coagulans 2-6 chromosome, complete genome76.4553 %Subject ←→ Query32.363
NC_019842:3852062*Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,75.432 %Subject ←→ Query32.6161
NC_007759:1169547Syntrophus aciditrophicus SB, complete genome76.0141 %Subject ←→ Query32.6811
NC_012108:1067876*Desulfobacterium autotrophicum HRM2, complete genome75.239 %Subject ←→ Query32.7569
NC_020410:3801583*Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete76.106 %Subject ←→ Query33.0165
NC_007759:1028977*Syntrophus aciditrophicus SB, complete genome76.4737 %Subject ←→ Query33.3392
NC_013406:3851877Paenibacillus sp. Y412MC10 chromosome, complete genome76.4675 %Subject ←→ Query33.4063
NC_019842:680000*Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,76.9363 %Subject ←→ Query33.4894
NC_019842:2575000Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,76.0018 %Subject ←→ Query33.5157
NC_020210:1275031*Geobacillus sp. GHH01, complete genome75.0031 %Subject ←→ Query33.58
NC_016593:596500Geobacillus thermoleovorans CCB_US3_UF5 chromosome, complete75.1869 %Subject ←→ Query34.0351
NC_014314:576465*Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, complete76.5043 %Subject ←→ Query34.0865
NC_015577:2203835*Treponema azotonutricium ZAS-9 chromosome, complete genome76.8719 %Subject ←→ Query34.1225
NC_006322:1994000Bacillus licheniformis ATCC 14580, complete genome78.5172 %Subject ←→ Query34.2412
NC_006270:204000*Bacillus licheniformis ATCC 14580, complete genome79.1391 %Subject ←→ Query34.2838
NC_017188:3764061Bacillus amyloliquefaciens TA208 chromosome, complete genome78.6581 %Subject ←→ Query34.2893
NC_006270:568171*Bacillus licheniformis ATCC 14580, complete genome78.9706 %Subject ←→ Query34.4572
NC_017191:3766960Bacillus amyloliquefaciens XH7 chromosome, complete genome78.318 %Subject ←→ Query34.5397
NC_007759:2315490Syntrophus aciditrophicus SB, complete genome76.731 %Subject ←→ Query34.5463
NC_016112:1330500*Methylomicrobium alcaliphilum chromosome, complete genome75.4351 %Subject ←→ Query34.6108
NC_017191:2514401*Bacillus amyloliquefaciens XH7 chromosome, complete genome75.0092 %Subject ←→ Query34.7256
NC_012108:442493*Desulfobacterium autotrophicum HRM2, complete genome75.0582 %Subject ←→ Query34.7264
NC_017190:3812065Bacillus amyloliquefaciens LL3 chromosome, complete genome78.5539 %Subject ←→ Query35.0987
NC_015634:959396Bacillus coagulans 2-6 chromosome, complete genome76.6207 %Subject ←→ Query35.0988
NC_011035:829945Neisseria gonorrhoeae NCCP11945 chromosome, complete genome77.8707 %Subject ←→ Query35.3078
NC_006270:1119000Bacillus licheniformis ATCC 14580, complete genome76.5165 %Subject ←→ Query35.8396
NC_006270:2657726*Bacillus licheniformis ATCC 14580, complete genome77.3192 %Subject ←→ Query36.0328
NC_014972:322056Desulfobulbus propionicus DSM 2032 chromosome, complete genome75.7935 %Subject ←→ Query36.0433
NC_016048:351205Oscillibacter valericigenes Sjm18-20, complete genome76.6942 %Subject ←→ Query36.0895
NC_019842:1203291Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,76.9669 %Subject ←→ Query36.1785
NC_014364:2751662*Spirochaeta smaragdinae DSM 11293 chromosome, complete genome75.4075 %Subject ←→ Query36.1819
NC_008639:378181Chlorobium phaeobacteroides DSM 266, complete genome75.5208 %Subject ←→ Query36.2623
NC_020272:20435Bacillus amyloliquefaciens IT-45, complete genome76.7249 %Subject ←→ Query36.4827
NC_006270:2172693*Bacillus licheniformis ATCC 14580, complete genome75.2788 %Subject ←→ Query36.7478
NC_017188:2512357Bacillus amyloliquefaciens TA208 chromosome, complete genome75.2972 %Subject ←→ Query36.8106
NC_020272:84227*Bacillus amyloliquefaciens IT-45, complete genome76.973 %Subject ←→ Query36.8169
NC_015164:1158796*Bacteroides salanitronis DSM 18170 chromosome, complete genome76.9179 %Subject ←→ Query36.965
NC_007759:1356439*Syntrophus aciditrophicus SB, complete genome76.6912 %Subject ←→ Query37.0877
NC_014624:2211771Eubacterium limosum KIST612 chromosome, complete genome76.1857 %Subject ←→ Query37.1827
NC_009483:3727490*Geobacter uraniireducens Rf4 chromosome, complete genome75.9712 %Subject ←→ Query37.2173
NC_015634:652000*Bacillus coagulans 2-6 chromosome, complete genome77.5735 %Subject ←→ Query37.5131
NC_015577:3589884*Treponema azotonutricium ZAS-9 chromosome, complete genome77.1354 %Subject ←→ Query37.6311
NC_013037:48900Dyadobacter fermentans DSM 18053, complete genome75.9896 %Subject ←→ Query37.6824
NC_017190:591139Bacillus amyloliquefaciens LL3 chromosome, complete genome75.1042 %Subject ←→ Query38.1402
NC_008639:2968000*Chlorobium phaeobacteroides DSM 266, complete genome75.864 %Subject ←→ Query38.2214
NC_016048:751000*Oscillibacter valericigenes Sjm18-20, complete genome75.4044 %Subject ←→ Query38.2715
NC_014364:815346Spirochaeta smaragdinae DSM 11293 chromosome, complete genome78.8082 %Subject ←→ Query38.5007
NC_015709:1769806*Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, complete80.674 %Subject ←→ Query38.7653
NC_007759:2179000*Syntrophus aciditrophicus SB, complete genome76.9179 %Subject ←→ Query38.7732
NC_017188:3839478*Bacillus amyloliquefaciens TA208 chromosome, complete genome75.4626 %Subject ←→ Query38.7965
NC_016048:1602500Oscillibacter valericigenes Sjm18-20, complete genome75.6985 %Subject ←→ Query38.8165
NC_009483:1936486Geobacter uraniireducens Rf4 chromosome, complete genome75.3646 %Subject ←→ Query38.9641
NC_016048:308342Oscillibacter valericigenes Sjm18-20, complete genome75.0797 %Subject ←→ Query39.312
NC_017191:3841170*Bacillus amyloliquefaciens XH7 chromosome, complete genome75.4626 %Subject ←→ Query39.5317
NC_015873:380485*Megasphaera elsdenii DSM 20460, complete genome78.704 %Subject ←→ Query39.5869
NC_016048:2907702*Oscillibacter valericigenes Sjm18-20, complete genome75.9099 %Subject ←→ Query39.698
NC_009328:2378345Geobacillus thermodenitrificans NG80-2 chromosome, complete genome76.4553 %Subject ←→ Query39.8234
NC_015172:1002872Syntrophobotulus glycolicus DSM 8271 chromosome, complete genome76.2561 %Subject ←→ Query39.8772
NC_007759:2097734*Syntrophus aciditrophicus SB, complete genome78.5018 %Subject ←→ Query40.0061
NC_020410:1123121*Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete76.8811 %Subject ←→ Query40.5049
NC_014364:4488875Spirochaeta smaragdinae DSM 11293 chromosome, complete genome77.9963 %Subject ←→ Query40.795
NC_009483:2489000*Geobacter uraniireducens Rf4 chromosome, complete genome75.193 %Subject ←→ Query41.1564
NC_020210:2133996*Geobacillus sp. GHH01, complete genome77.5306 %Subject ←→ Query41.2844
NC_014364:3707311Spirochaeta smaragdinae DSM 11293 chromosome, complete genome77.6072 %Subject ←→ Query41.4323
NC_015388:2143329*Desulfobacca acetoxidans DSM 11109 chromosome, complete genome77.1875 %Subject Query42.2577
NC_002936:149100*Dehalococcoides ethenogenes 195, complete genome75.0766 %Subject Query43.0897
NC_011060:2099255Pelodictyon phaeoclathratiforme BU-1, complete genome75.1961 %Subject Query43.0974
NC_020410:3868573*Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete75.1164 %Subject Query43.367
NC_014364:3001597Spirochaeta smaragdinae DSM 11293 chromosome, complete genome77.7512 %Subject Query43.5079
NC_013037:6281164*Dyadobacter fermentans DSM 18053, complete genome77.3009 %Subject Query45.9244
NC_007498:2087811Pelobacter carbinolicus DSM 2380, complete genome76.0692 %Subject Query48.6512