Pre_GI: OUP Neighbours

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Query: NC_014976:2231984 Bacillus subtilis BSn5 chromosome, complete genome

D: 39.042

Host Lineage: Bacillus subtilis; Bacillus; Bacillaceae; Bacillales; Firmicutes; Bacteria

General Information: Bacillus subtilis BSn5 was isolated from Amorphophallus konjac calli tissue culture. Bacilllus subtilis BSn5 could inhibit Erwinia carotovora subsp. carotovora strain SCG1, which causes Amorphophallus soft rot disease and affects Amorphophallus industry development This organism was one of the first bacteria studied, and was named Vibrio subtilis in 1835 and renamed Bacillus subtilis in 1872. It is one of the most well characterized bacterial organisms, and is a model system for cell differentiation and development. This soil bacterium can divide asymmetrically, producing an endospore that is resistant to environmental factors such as heat, acid, and salt, and which can persist in the environment for long periods of time. The endospore is formed at times of nutritional stress, allowing the organism to persist in the environment until conditions become favorable. Prior to the decision to produce the spore the bacterium might become motile, through the production of flagella, and also take up DNA from the environment through the competence system.The sporulation process is complex and involves the coordinated regulation of hundreds of genes in the genome. This initial step results in the coordinated asymmetric cellular division and endospore formation through multiple stages that produces a single spore from the mother cell.

Number of Neighbours: 13




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_005955:1284500*Bartonella quintana str. Toulouse, complete genome75.0613 %Subject Query27.0975
NC_012881:3362955*Desulfovibrio salexigens DSM 2638, complete genome78.7439 %Subject ←→ Query30.3411
NC_011830:3528665Desulfitobacterium hafniense DCB-2, complete genome75.3248 %Subject ←→ Query30.3776
NC_011830:4645453*Desulfitobacterium hafniense DCB-2, complete genome76.3266 %Subject ←→ Query31.6026
NC_014833:2855543*Ruminococcus albus 7 chromosome, complete genome75.4442 %Subject ←→ Query32.9229
NC_011830:2177187Desulfitobacterium hafniense DCB-2, complete genome76.011 %Subject ←→ Query35.1804
NC_007907:1732500*Desulfitobacterium hafniense Y51, complete genome75.7782 %Subject ←→ Query35.289
NC_011830:259121*Desulfitobacterium hafniense DCB-2, complete genome75.7261 %Subject ←→ Query35.3211
NC_007907:3872805Desulfitobacterium hafniense Y51, complete genome76.3726 %Subject ←→ Query37.2732
NC_007759:723675*Syntrophus aciditrophicus SB, complete genome76.4675 %Subject ←→ Query38.1115
NC_014976:1174430*Bacillus subtilis BSn5 chromosome, complete genome82.739 %Subject ←→ Query43.0512
NC_015690:7785875Paenibacillus mucilaginosus KNP414 chromosome, complete genome75.5515 %Subject Query51.7482
NC_015690:632565*Paenibacillus mucilaginosus KNP414 chromosome, complete genome75.9314 %Subject Query58.9304