Pre_GI: OUP Neighbours

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Query: NC_011979:3341099 Geobacter sp. FRC-32, complete genome

D: 41.2739

Host Lineage: Geobacter daltonii; Geobacter; Geobacteraceae; Desulfuromonadales; Proteobacteria; Bacteria

General Information: This organism is able to reduce uranium and may be useful for in situ bioremediation of uranium. An iron(III)-reducing bacterium isolated from the uranium-contaminated subsurface of the U.S. Department of Energy NABIR Field Research Center (FRC), Oak Ridge, Tennessee, USA. Several recent studies have verified using cultivation-independent methods that the Geobacteraceae are predominant in subsurface environments where dissimilatory metal reduction is important to the remediation of uranium and other contaminants.

Number of Neighbours: 17




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_012108:721005Desulfobacterium autotrophicum HRM2, complete genome76.5717 %Subject Query29.6267
NC_012108:1664341Desulfobacterium autotrophicum HRM2, complete genome79.3137 %Subject Query30.4764
NC_011830:1190502*Desulfitobacterium hafniense DCB-2, complete genome76.3542 %Subject Query30.6359
NC_012108:4907430Desulfobacterium autotrophicum HRM2, complete genome77.4969 %Subject ←→ Query31.377
NC_012108:4971086Desulfobacterium autotrophicum HRM2, complete genome78.1311 %Subject ←→ Query31.5092
NC_012108:1694817Desulfobacterium autotrophicum HRM2, complete genome78.4375 %Subject ←→ Query31.5108
NC_007759:2146254Syntrophus aciditrophicus SB, complete genome75.9283 %Subject ←→ Query32.8649
NC_007759:1028977*Syntrophus aciditrophicus SB, complete genome77.6746 %Subject ←→ Query33.3392
NC_012108:904260Desulfobacterium autotrophicum HRM2, complete genome75.7077 %Subject ←→ Query34.2108
NC_012108:442493*Desulfobacterium autotrophicum HRM2, complete genome77.9167 %Subject ←→ Query34.7264
NC_011768:1718869*Desulfatibacillum alkenivorans AK-01, complete genome77.5398 %Subject ←→ Query35.6298
NC_012108:4118888Desulfobacterium autotrophicum HRM2, complete genome76.8536 %Subject ←→ Query35.8685
NC_014364:3500041Spirochaeta smaragdinae DSM 11293 chromosome, complete genome76.1397 %Subject ←→ Query37.6252
NC_014364:815346Spirochaeta smaragdinae DSM 11293 chromosome, complete genome76.9455 %Subject ←→ Query38.5007
NC_007759:2179000*Syntrophus aciditrophicus SB, complete genome76.1857 %Subject ←→ Query38.7732
NC_011979:2352961*Geobacter sp. FRC-32, complete genome79.6661 %Subject ←→ Query43.5464
NC_011979:1590432*Geobacter sp. FRC-32, complete genome79.5221 %Subject ←→ Query45.0636