Pre_GI Gene

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Host: NC_013440 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013440:1879306 Haliangium ochraceum DSM 14365, complete genome

Host Lineage: Haliangium ochraceum; Haliangium; Kofleriaceae; Myxococcales; Proteobacteria; Bacteria

General Information: Isolation: Seaweed collected from coastal sands from Japan; Temp: Mesophile; Temp: 30C; Habitat: Coastal, Marine, Sand. This organism, like other myxobacteria, undergoes a complex development and differentiation pathway. When cell density increases, the organism switches to "social motility" where aggregates of cells can gather together into masses termed fruiting bodies that may consist of up to 100 000 cells. Haliangium ochraceum is a true marine organism requiring 1-3% NaCl for growth.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
187930618833074002serinethreonine protein kinaseQuickGO ontologyBLASTP
18832971883812516RNA polymerase sigma-24 subunit ECF subfamilyQuickGO ontologyBLASTP
18841591884935777hypothetical protein
188553618908155280signal transduction histidine kinase with CheB and CheR activityQuickGO ontologyBLASTP
189097618920431068amidohydrolase 2QuickGO ontology
189217918933691191hypothetical proteinBLASTP
18934711894109639Glutathione S-transferase domain proteinQuickGO ontologyBLASTP
18944951895202708hypothetical protein
189519918962451047hypothetical protein
189624218973541113Radical SAM domain proteinQuickGO ontologyBLASTP
18975011897767267hypothetical protein
18982551898680426hypothetical proteinBLASTP
189889319003111419transposase IS4 family proteinQuickGO ontologyBLASTP