Pre_GI Gene

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Host: NC_006347 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006347:4961865 Bacteroides fragilis YCH46, complete genome

Host Lineage: Bacteroides fragilis; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This organism can become an opportunistic pathogen, infecting anywhere in the body and causing abcess formation. Enterotoxigenic Bacterioides fragilis (ETBF) is associated with diarrheal diseases. This strain was isolated from a patient with septicemia in Japan. Common gut bacterium. This group of microbes constitute the most abundant members of the intestinal microflora of mammals. Typically they are symbionts, but they can become opportunistic pathogens in the peritoneal (intra-abdominal) cavity. Breakdown of complex plant polysaccharides such as cellulose and hemicellulose and host-derived polysaccharides such as mucopolysaccharides is aided by the many enzymes these organisms produce. Although only a minor component of the human gut microflora, this organism is a major component of clinical specimens and is the most common anaerobe isolated.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
496186549638021938hypothetical proteinBLASTP
49638334964069237hypothetical proteinBLASTP
49642124964673462hypothetical proteinBLASTP
496525449666271374Xaa-Pro aminopeptidaseQuickGO ontologyBLASTP
496689249683701479RNA polymerase sigma-54QuickGO ontologyBLASTP
49683984969078681hypothetical proteinBLASTP
49691094969489381glycine cleavage system protein HQuickGO ontologyBLASTP
49696814970187507phosphoribosylaminoimidazole carboxylaseQuickGO ontologyBLASTP
4970192497207218814-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseQuickGO ontologyBLASTP
49722654973038774hypothetical proteinBLASTP
497305149747721722putative endo-14-beta-xylanaseQuickGO ontologyBLASTP
497479449760861293hypothetical proteinBLASTP
497632049778071488putative outer membrane protein probably involved in nutrient bindingQuickGO ontologyBLASTP
497794749809432997putative outer membrane protein probably involved in nutrient bindingQuickGO ontologyBLASTP
49811344981304171hypothetical protein
498169049839842295beta-glucosidaseQuickGO ontologyBLASTP