Pre_GI Gene

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Host: NC_021182 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_021182:2921000 Clostridium pasteurianum BC1, complete genome

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
292116629222781113hypothetical proteinBLASTP
292247929236031125transposase family proteinQuickGO ontologyBLASTP
29244752925299825hypothetical proteinBLASTP
29260042926141138hypothetical protein
292675429278841131flagellinflagellar hook associated proteinQuickGO ontologyBLASTP
29284182928759342hypothetical proteinBLASTP
292887529308361962flagellar capping proteinQuickGO ontologyBLASTP
29310042931390387flagellar biosynthetic protein FliSQuickGO ontologyBLASTP
29314032931693291hypothetical protein
29317872932161375flagellar protein FlaGQuickGO ontologyBLASTP
29322522932467216carbon storage regulator CsrAQuickGO ontologyBLASTP
29324722932897426hypothetical proteinBLASTP
293300829340421035flagellar hook-associated protein 3QuickGO ontologyBLASTP
293415629360181863flagellar hook-associated protein FlgKQuickGO ontologyBLASTP
29360322936442411FlgN proteinQuickGO ontologyBLASTP
29364442936731288flagellar biosynthesis anti-sigma factor FlgMQuickGO ontologyBLASTP
293697029381181149flagellar motor switch protein FliNQuickGO ontologyBLASTP
29381112939106996flagellar motor switch protein FliMQuickGO ontologyBLASTP
29392952939696402chemotaxis signal transduction proteinQuickGO ontologyBLASTP
29397632940122360response regulator containing CheY-like receiver domain and AraC-type DNA-binding domainQuickGO ontologyBLASTP
29401402940742603chemotaxis protein CheC inhibitor of MCP methylationQuickGO ontologyBLASTP
294075429428172064chemotaxis protein histidine kinase-like proteinQuickGO ontologyBLASTP
29428322943599768methylase of chemotaxis methyl-accepting proteinQuickGO ontologyBLASTP
29436022943904303BLASTP
29439182944655738chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domainQuickGO ontologyBLASTP
29447112945202492chemotaxis proteinQuickGO ontologyBLASTP
29452312945677447chemotaxis signal transduction proteinQuickGO ontologyBLASTP
29475272948363837transcriptional antiterminatorQuickGO ontologyBLASTP
29485902949555966L-lactate dehydrogenaseQuickGO ontologyBLASTP
29496572950496840branched-chain amino acid aminotransferase4-amino-4-deoxychorismate lyaseQuickGO ontologyBLASTP
29506292951270642HAD-superfamily subfamily IB hydrolase TIGR01490QuickGO ontologyBLASTP
29513562951712357Protein of unknown function DUF1292QuickGO ontologyBLASTP
295185529553733519pyruvateferredoxin flavodoxin oxidoreductase homodimericQuickGO ontologyBLASTP