Pre_GI Gene

Some Help

Host: NC_020389 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_020389:571466 Methanosarcina mazei Tuc01, complete genome

Host Lineage: Methanosarcina mazei; Methanosarcina; Methanosarcinaceae; Methanosarcinales; Euryarchaeota; Archaea

General Information: This organism is a strictly anaerobic, non-motile, methane-producing archaeon. This organism can also aggregate forming large irregular shaped clumps of cells. Occasionally these aggregates can grow to 1000 microns or more in diameter. Growth occurs at pH 5.5-8.0, with optimum growth at pH 6.8-7.2. Growth occurs at pH 5.5-8.0, with optimum growth at pH 6.8-7.2. Can be found in decaying leaf litter, garden soil, sewage treatment sludge digestors, black mud, feces of herbivores and other urban waste and sewage products.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5714665732651800Exoribonuclease IIQuickGO ontologyBLASTP
573937574287351Hypothetical proteinQuickGO ontologyBLASTP
574877575029153hypothetical protein
575030575194165hypothetical protein
575151575591441Hypothetical proteinQuickGO ontology
575945576217273hypothetical proteinBLASTP
576336576455120hypothetical protein
576632576844213hypothetical proteinBLASTP
576890577138249hypothetical proteinBLASTP
577212577334123hypothetical protein
577765578439675CRISPR-associated RecB family exonuclease Cas4bQuickGO ontologyBLASTP
578457578747291CRISPR-associated protein Cas2QuickGO ontologyBLASTP
578765579664900CRISPR-associated protein Cas1QuickGO ontologyBLASTP
580267580512246CRISPR-associated helicase Cas3QuickGO ontologyBLASTP
580700580849150CRISPR-associated protein Cas5h familyQuickGO ontologyBLASTP
580866581312447CRISPR-associated protein Csh2 familyQuickGO ontologyBLASTP
581425581568144CRISPR-associated protein Csh1 familyQuickGO ontologyBLASTP
581736581855120CRISPR-associated protein Csh1 familyQuickGO ontology
581913582515603transcriptional regulatorQuickGO ontologyBLASTP
583881584111231hypothetical protein
584086584370285Hypothetical proteinQuickGO ontologyBLASTP
585441586259819ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
586355587149795Hypothetical proteinQuickGO ontologyBLASTP
587411588217807Hypothetical proteinQuickGO ontologyBLASTP
590552591544993Galactose-1-phosphate uridylyltransferaseQuickGO ontologyBLASTP