Pre_GI Gene

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Host: NC_020389 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_020389:1777409 Methanosarcina mazei Tuc01, complete genome

Host Lineage: Methanosarcina mazei; Methanosarcina; Methanosarcinaceae; Methanosarcinales; Euryarchaeota; Archaea

General Information: This organism is a strictly anaerobic, non-motile, methane-producing archaeon. This organism can also aggregate forming large irregular shaped clumps of cells. Occasionally these aggregates can grow to 1000 microns or more in diameter. Growth occurs at pH 5.5-8.0, with optimum growth at pH 6.8-7.2. Growth occurs at pH 5.5-8.0, with optimum growth at pH 6.8-7.2. Can be found in decaying leaf litter, garden soil, sewage treatment sludge digestors, black mud, feces of herbivores and other urban waste and sewage products.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
17767261777412687DNA-binding HTH domain in riboflavin kinase CTP-dependent archaeal riboflavin kinaseQuickGO ontologyBLASTP
1777409177815274434-dihydroxy-2-butanone 4-phosphate synthaseQuickGO ontologyBLASTP
17781691778294126hypothetical protein
17785241779444921Cobalt-zinc-cadmium resistance proteinQuickGO ontologyBLASTP
177945017805471098Chorismate synthaseQuickGO ontologyBLASTP
178107317833012229hypothetical proteinBLASTP
17834821783991510Hypothetical proteinQuickGO ontologyBLASTP
17844521784862411hypothetical proteinBLASTP
17849011785731831transcriptional regulator ArsR familyQuickGO ontologyBLASTP
17860041786150147hypothetical protein
178683817880041167hypothetical proteinBLASTP
17880781788806729hypothetical proteinBLASTP
17889111789042132hypothetical protein
17890391789173135hypothetical protein
17896481789821174hypothetical protein
17898281790055228Hypothetical proteinQuickGO ontologyBLASTP
17900951790673579transcriptional regulator ArsR familyQuickGO ontologyBLASTP
17908021791746945hypothetical protein
17926011792795195hypothetical protein
17931871793333147hypothetical proteinBLASTP
17937471794421675Radical SAM domain heme biosynthesis proteinQuickGO ontologyBLASTP
17945011794911411Mobile element proteinQuickGO ontologyBLASTP
17962561796465210Mobile element proteinQuickGO ontologyBLASTP
17964461796580135TransposaseQuickGO ontology
17966431797062420Radical SAM domain heme biosynthesis proteinQuickGO ontologyBLASTP
17970741797604531Heme biosynthesis proteinQuickGO ontologyBLASTP
17976261798084459Heme biosynthesis proteinQuickGO ontologyBLASTP
17982961798967672Siroheme synthase Precorrin-2 oxidaseSirohydrochlorin ferrochelataseQuickGO ontologyBLASTP
179914518004911347Glutamyl-tRNA reductaseQuickGO ontologyBLASTP