Pre_GI Gene

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Host: NC_017221 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017221:1763914 Bifidobacterium longum subsp. longum KACC 91563 chromosome,

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
17639141764771858alphabeta hydrolaseQuickGO ontologyBLASTP
17648971765556660hypothetical proteinBLASTP
17657851766156372thioredoxinQuickGO ontologyBLASTP
17663301767313984hypothetical proteinBLASTP
17673961767545150hypothetical proteinBLASTP
176766017690391380hypothetical proteinBLASTP
176926117706971437Etk-like tyrosine kinaseQuickGO ontologyBLASTP
17709391771373435hypothetical proteinBLASTP
177167917730701392hypothetical proteinBLASTP
17734101773538129hypothetical proteinBLASTP
17735451773781237hypothetical proteinBLASTP
177424817752911044hypothetical proteinBLASTP
17752911775941651hypothetical proteinBLASTP
17770141777202189hypothetical proteinBLASTP
17778781778027150hypothetical protein
17797661780041276hypothetical protein
178054217817861245transposaseQuickGO ontologyBLASTP
17819901782916927transposaseQuickGO ontologyBLASTP
17828751783609735hypothetical proteinBLASTP
17840701784651582hypothetical proteinBLASTP
17846481784866219hypothetical proteinBLASTP
17848671785040174hypothetical proteinBLASTP
17864801786623144integrase catalytic domain proteinQuickGO ontologyBLASTP
17868041787016213M22 peptidaseQuickGO ontologyBLASTP
17870131787237225hypothetical proteinBLASTP
17874451787669225deoxyuridine 5-triphosphate nucleotidohydrolaseQuickGO ontology
17877251788393669hypothetical proteinBLASTP
17884591788590132hypothetical proteinBLASTP
178860617900001395transposaseQuickGO ontologyBLASTP
17899971790758762hypothetical proteinBLASTP
17908901791525636Integrase catalytic regionQuickGO ontologyBLASTP
179181317928291017hypothetical proteinBLASTP
17928631793441579hypothetical proteinBLASTP
179362317950231401transmembrane protein possibly involved in polysaccharide biosynthesisQuickGO ontologyBLASTP
179504817962111164hypothetical proteinBLASTP
17962151796499285Glycosyltransferases involved in cell wall biogenesisQuickGO ontology
179718017982891110hypothetical proteinBLASTP
179828617993921107glycosyltransferaseQuickGO ontologyBLASTP
179939718005421146hypothetical proteinBLASTP
18005391801486948hypothetical proteinBLASTP