Pre_GI Gene

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Host: NC_017186 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017186:3947874 Amycolatopsis mediterranei S699 chromosome, complete genome

Host Lineage: Amycolatopsis mediterranei; Amycolatopsis; Pseudonocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Amycolatopsis belongs to the actinomycete family Pseudonocardiaceae. Amycolatopsis mediterranei produces the antibiotic rifamycin, derivatives of which are used for curing tuberculosis and leprosy. Antibiotic producing bacterium.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
39478743948626753cyclaseQuickGO ontologyBLASTP
3948859394894890hypothetical protein
394915239513682217carbon-monoxide dehydrogenase large subunitQuickGO ontologyBLASTP
39513653952360996carbon-monoxide dehydrogenase medium subunitQuickGO ontologyBLASTP
39523573952845489carbon-monoxide dehydrogenase small subunitQuickGO ontologyBLASTP
39529613953593633TetR family transcriptional regulatorQuickGO ontologyBLASTP
395389639558511956alpha-galactosidaseQuickGO ontologyBLASTP
39561333956924792hypothetical proteinBLASTP
39573903957785396hypothetical proteinBLASTP
39583763959110735hypothetical protein
39592813959394114hypothetical protein
39594413959761321hypothetical proteinBLASTP
39601203960335216hypothetical proteinBLASTP
39607083961148441hypothetical proteinBLASTP
39612003961544345hypothetical proteinBLASTP
39617883962360573TetR family transcriptional regulatorQuickGO ontologyBLASTP
396263139637761146glyoxalasebleomycin resistance proteindioxygenaseQuickGO ontologyBLASTP
39641133964337225hypothetical proteinBLASTP
39644243965194771hypothetical proteinBLASTP
396520339662941092beta-lactamase class CQuickGO ontologyBLASTP
39670423967395354hypothetical proteinBLASTP
39673993968106708short-chain dehydrogenaseQuickGO ontologyBLASTP
39682563969149894LysR family transcriptional regulatorQuickGO ontologyBLASTP
39692263969480255hypothetical protein
39696513970265615ECF subfamily RNA polymerase sigma-70 factorQuickGO ontologyBLASTP
39702653971023759hypothetical proteinBLASTP