Pre_GI Gene

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Host: NC_016446 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016446:26500 Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, complete

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2706228033972hypothetical proteinBLASTP
2807929059981ISVch5 transposaseQuickGO ontologyBLASTP
29353305941242hypothetical proteinBLASTP
3111531645531hypothetical proteinBLASTP
3164532316672hypothetical proteinBLASTP
3231832668351hypothetical proteinBLASTP
32937348651929threonyl-tRNA synthetaseQuickGO ontologyBLASTP
3503135420390initiation factor IF3QuickGO ontologyBLASTP
355243571819550S ribosomal protein L35QuickGO ontologyBLASTP
357603611335450S ribosomal protein L20QuickGO ontologyBLASTP
3619537157963site-specific recombinase IntI4QuickGO ontologyBLASTP
3763737804168hypothetical proteinBLASTP
3778538159375hypothetical proteinBLASTP
3840438592189hypothetical proteinBLASTP
3895639138183hypothetical proteinBLASTP
3929039403114hypothetical proteinBLASTP
3939439645252hypothetical proteinBLASTP
3978640229444hypothetical proteinBLASTP
4038041009630acetyltransferaseQuickGO ontologyBLASTP
4116541917753short chain dehydrogenasereductase family oxidoreductaseQuickGO ontologyBLASTP
4191742045129hypothetical proteinBLASTP
4221942401183hypothetical proteinBLASTP
4419044867678hypothetical proteinBLASTP
4487644995120hypothetical proteinBLASTP
45029462371209deoxyguanosinetriphosphate triphosphohydrolase-related proteinQuickGO ontologyBLASTP