Pre_GI Gene

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Host: NC_015957 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015957:2678544 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
267854426796681125succinyl-CoA ligase ADP-forming subunit betaQuickGO ontologyBLASTP
26796802680576897succinyl-CoA synthetase subunit alphaQuickGO ontologyBLASTP
268075126823251575aldehyde dehydrogenaseQuickGO ontologyBLASTP
268459126858771287transposase mutator typeQuickGO ontologyBLASTP
26859522686716765inositol monophosphataseQuickGO ontologyBLASTP
26869022687474573transposaseQuickGO ontologyBLASTP
26875212687808288putative integraserecombinaseQuickGO ontologyBLASTP
26878352688458624hypothetical protein
26886932689188496BLASTP
26891912689958768methyltransferase type 12QuickGO ontologyBLASTP
26901472690365219
26904362690693258hypothetical protein
26906902691253564ECF subfamily RNA polymerase sigma-24 subunitQuickGO ontologyBLASTP
26929942693488495hypothetical proteinBLASTP
26937012694102402hypothetical proteinBLASTP
26941282694598471hypothetical proteinBLASTP
26947862695505720hypothetical proteinBLASTP
269622426980321809VWA containing CoxE family proteinQuickGO ontologyBLASTP
269810226993101209ATPaseQuickGO ontologyBLASTP
270007327027962724transcriptional activator domain-containing proteinQuickGO ontologyBLASTP
27028322703275444hypothetical proteinBLASTP
27032722703706435TadE family proteinQuickGO ontologyBLASTP
27037032704119417TadE family proteinQuickGO ontologyBLASTP
27041242704324201hypothetical protein
27043832705282900Type II secretion system F domain-containing proteinQuickGO ontologyBLASTP
27052792706190912Type II secretion system F domain-containing proteinQuickGO ontologyBLASTP
270618727075301344type II secretion system protein EQuickGO ontologyBLASTP
27075272708369843hypothetical proteinBLASTP
27083662709058693SAF domain-containing proteinQuickGO ontologyBLASTP
27091502709995846hypothetical proteinBLASTP
27099892710528540hypothetical proteinBLASTP
27108632711627765hypothetical protein