Pre_GI Gene

Some Help

Host: NC_015733 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015733:2720183 Pseudomonas putida S16 chromosome, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
27201832720599417D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding proteinQuickGO ontologyBLASTP
27211092721864756aldolase II superfamily proteinQuickGO ontologyBLASTP
272187827231731296major facilitator family transporterQuickGO ontologyBLASTP
27233302724307978LysR family transcriptional regulatorQuickGO ontologyBLASTP
272460127260161416amino acid permease-associated proteinQuickGO ontologyBLASTP
27263612726723363AsnC family transcriptional regulatorQuickGO ontologyBLASTP
272696727280191053ornithine cyclodeaminaseQuickGO ontologyBLASTP
27280522728990939hypothetical proteinBLASTP
27296892730672984ISPsy2 transposaseQuickGO ontologyBLASTP
27307622731424663hypothetical protein
273217227335211350integrase family proteinQuickGO ontologyBLASTP
273378627350541269integrase family proteinQuickGO ontologyBLASTP
27352082736122915LysR family transcriptional regulatorQuickGO ontologyBLASTP
273633827373511014alcohol dehydrogenaseQuickGO ontologyBLASTP
273786427392491386hypothetical proteinBLASTP
273924927406041356GntR family transcriptional regulatorQuickGO ontologyBLASTP
274079327421031311major facilitator transporterQuickGO ontologyBLASTP
274216927434821314mandelate racemasemuconate lactonizing proteinQuickGO ontologyBLASTP
27435842743784201
27438032744531729BLASTP
274461627458001185phage integraseQuickGO ontologyBLASTP
27459702746146177hypothetical protein
27461612746895735phosphoprotein phosphataseQuickGO ontologyBLASTP
27469472747408462hypothetical proteinBLASTP
27474552747997543hypothetical protein
27479942748116123hypothetical proteinBLASTP
27495422749748207hypothetical protein
27500782750623546hypothetical proteinBLASTP
27511812751735555hypothetical proteinBLASTP
27527712753283513hypothetical proteinBLASTP
27532852753902618exonuclease phage-typeQuickGO ontologyBLASTP
27538862754647762ERF family proteinQuickGO ontologyBLASTP
275465827558391182hypothetical proteinBLASTP
27560712756247177hypothetical protein
27562442756438195hypothetical proteinBLASTP
27564352756851417hypothetical protein
27585272758943417hypothetical protein
27598312760169339hypothetical protein