Pre_GI Gene

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Host: NC_015410 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015410:1202370 Pseudomonas mendocina NK-01 chromosome, complete genome

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocin is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
12023701203362993integraseQuickGO ontologyBLASTP
120335912045461188hypothetical proteinBLASTP
120470712059361230putative phage-related membrane proteinQuickGO ontologyBLASTP
12059401206269330hypothetical protein
120627912076911413putative coat protein A of bacteriophage Pf1QuickGO ontologyBLASTP
12077181207939222hypothetical protein
12082031208382180hypothetical proteinBLASTP
12083981208766369hypothetical proteinBLASTP
12090211209386366hypothetical proteinBLASTP
12100591210241183hypothetical proteinBLASTP
12105501210723174hypothetical proteinBLASTP
12107871211176390mutator MutT proteinQuickGO ontologyBLASTP
12112561211990735putative restriction endonucleaseQuickGO ontologyBLASTP
121276212141171356hypothetical proteinBLASTP
121575112168511101GTP-dependent nucleic acid-binding protein EngDQuickGO ontologyBLASTP
12168771217467591peptidyl-tRNA hydrolaseQuickGO ontologyBLASTP
1217528121814261550S ribosomal protein L25general stress protein CtcQuickGO ontologyBLASTP
12182501219071822ribose-phosphate pyrophosphokinaseQuickGO ontologyBLASTP
121947012203428734-diphosphocytidyl-2-C-methyl-D-erythritol kinaseQuickGO ontologyBLASTP
12208411221455615outer membrane lipoprotein LolBQuickGO ontologyBLASTP
122145512231641710TPR repeat-containing proteinQuickGO ontologyBLASTP
122339212246721281glutamyl-tRNA reductaseQuickGO ontologyBLASTP
122466912257511083peptide chain release factor 1QuickGO ontologyBLASTP
12258801226713834HemK family modification methylaseQuickGO ontologyBLASTP
12267181227470753molybdopterin biosynthesis protein MoeBQuickGO ontologyBLASTP
12274331228248816glutamate racemaseQuickGO ontologyBLASTP