Pre_GI Gene

Some Help

Host: NC_015312 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015312:3675148 Pseudonocardia dioxanivorans CB1190 chromosome, complete genome

Host Lineage: Pseudonocardia dioxanivorans; Pseudonocardia; Pseudonocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Country: USA; Environment: Sludge, Fresh water; Isolation: Industrial sludge contaminated; Temp: Mesophile; Temp: 30C. Pseudonocardia members are abundant in diverse environments, and are known to degrade a variety of pollutants. These bacteria are also important in biocatalysis applications and in the production of antibiotics. Pseudonocardia dioxanivorans was first isolated from 1,4-dioxane containing sludge. This organism is able to grow using 1,4-dioxane, a toxic compound used as an industrial solvent, as the sole carbon source.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
367514836764251278geranylgeranyl reductaseQuickGO ontologyBLASTP
36764533676650198hypothetical protein
36767973677261465Cupin 2 barrel domain-containing proteinQuickGO ontologyBLASTP
367725836784601203S-adenosylmethionine synthaseQuickGO ontologyBLASTP
36787163679315600SH3 type 3 domain-containing proteinQuickGO ontology
36796573679899243
368011636812821167hypothetical proteinBLASTP
36818943682499606hypothetical proteinBLASTP
36828223683043222hypothetical protein
368398636856741689transcriptional regulator CdaRQuickGO ontologyBLASTP
36857993686395597ferritin Dps family proteinQuickGO ontologyBLASTP
36869743687156183hypothetical protein
36873063688298993hypothetical proteinBLASTP
368829136896791389NADH dehydrogenase ubiquinoneQuickGO ontologyBLASTP
36899433690698756hypothetical protein
36908913691343453hypothetical proteinBLASTP
36917583691886129BLASTP
36920213692356336hypothetical proteinBLASTP
36923573693049693BLASTP
36930463693309264hypothetical proteinBLASTP
369330636950301725cyclic nucleotide-binding proteinQuickGO ontologyBLASTP
36954033696260858polyphosphatenucleotide phosphotransferaseQuickGO ontologyBLASTP
36962843696781498hypothetical protein
36974323697600169
369782236990301209formaldehyde dehydrogenase glutathione-independentQuickGO ontologyBLASTP
36997643700441678transport-associated proteinQuickGO ontologyBLASTP
3700520370240918901-deoxy-D-xylulose-5-phosphate synthaseQuickGO ontologyBLASTP
37031633703768606hypothetical protein
37039553704734780IstB domain-containing protein ATP-binding proteinQuickGO ontologyBLASTP
37065573707552996integrase family proteinQuickGO ontologyBLASTP
370764737093681722integrase family proteinQuickGO ontologyBLASTP
37104413711220780BLASTP
371262137137421122MscS Mechanosensitive ion channelQuickGO ontologyBLASTP
37139063714082177hypothetical protein
37142533714711459hypothetical protein
371550037172661767pyruvate dehydrogenaseQuickGO ontologyBLASTP
37177063718125420membrane proteinQuickGO ontologyBLASTP
37184843719101618hypothetical proteinBLASTP
37190943719786693dienelactone hydrolaseQuickGO ontologyBLASTP
371983537218442010Erythromycin esteraseQuickGO ontologyBLASTP
37232813724171891SigBFG subfamily RNA polymerase sigma-28 subunitQuickGO ontologyBLASTP
37244613724852392
37249793725365387thioredoxinQuickGO ontologyBLASTP
372544837280752628ATP-dependent chaperone ClpBQuickGO ontologyBLASTP
37280663728449384hypothetical proteinBLASTP
37284463729441996chaperone DnaJ domain-containing proteinQuickGO ontologyBLASTP
37294453730101657protein grpEQuickGO ontologyBLASTP
373011037319961887Chaperone protein dnaKQuickGO ontologyBLASTP
37319983732552555hypothetical proteinBLASTP
37325663733039474heat shock protein Hsp20QuickGO ontologyBLASTP
37336353734066432sulfate transporterantisigma-factor antagonist STASQuickGO ontologyBLASTP
37341003734528429hypothetical proteinBLASTP
373477337366801908major facilitator superfamily proteinQuickGO ontologyBLASTP
37373973737654258transcription factor WhiBQuickGO ontologyBLASTP
37377523738678927ParB domain-containing protein nucleaseQuickGO ontologyBLASTP
37391743739413240hypothetical protein
37397063740278573hypothetical protein
37402833740642360hypothetical proteinBLASTP
37406623741345684transport-associated proteinQuickGO ontologyBLASTP
37415403741734195
37422293742420192BLASTP
374250337439301428glucose-6-phosphate 1-dehydrogenaseQuickGO ontologyBLASTP
37441403744337198hypothetical protein
374492237460641143hypothetical proteinBLASTP