Pre_GI Gene

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Host: NC_015312 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015312:1191633 Pseudonocardia dioxanivorans CB1190 chromosome, complete genome

Host Lineage: Pseudonocardia dioxanivorans; Pseudonocardia; Pseudonocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Country: USA; Environment: Sludge, Fresh water; Isolation: Industrial sludge contaminated; Temp: Mesophile; Temp: 30C. Pseudonocardia members are abundant in diverse environments, and are known to degrade a variety of pollutants. These bacteria are also important in biocatalysis applications and in the production of antibiotics. Pseudonocardia dioxanivorans was first isolated from 1,4-dioxane containing sludge. This organism is able to grow using 1,4-dioxane, a toxic compound used as an industrial solvent, as the sole carbon source.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
119163311929731341integrase family proteinQuickGO ontologyBLASTP
11929701193251282hypothetical protein
119339911945351137hypothetical proteinBLASTP
11945321195479948Bifunctional DNA primasepolymeraseQuickGO ontologyBLASTP
119567911979282250cell division protein FtsKSpoIIIEQuickGO ontologyBLASTP
11979281198890963hypothetical proteinBLASTP
11988871199210324hypothetical protein
11992071199368162hypothetical protein
11993651199568204hypothetical protein
11997601200617858GntR family transcriptional regulatorQuickGO ontologyBLASTP
12006171201171555putative kinaseQuickGO ontologyBLASTP
12013601202118759hypothetical protein
120244512035511107RelASpoT domain-containing proteinQuickGO ontologyBLASTP
120434412058191476hypothetical proteinBLASTP
12059431206500558Ion transport 2 domain-containing proteinQuickGO ontology
120680712078171011Bile acidsodium symporterQuickGO ontology
120807312091191047hypothetical proteinBLASTP
12092561210143888ECF subfamily RNA polymerase sigma-24 subunitQuickGO ontologyBLASTP
12102221210857636bifunctional deaminase-reductase domain-containing proteinQuickGO ontologyBLASTP
121436012155921233transposase IS111AIS1328IS1533QuickGO ontologyBLASTP