Pre_GI Gene

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Host: NC_015214 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015214:437733 Lactobacillus acidophilus 30SC chromosome, complete genome

Host Lineage: Lactobacillus acidophilus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This organism has been studied for its ability to help the human gut maintain its natural microbial community. Strains of this organism are also used in the production of yogurt, cheese and other fermented foods.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
4377334388391107X-Pro dipeptidaseQuickGO ontologyBLASTP
4389854399861002catabolite control protein AQuickGO ontologyBLASTP
4400404414101371glycerophosphoryl diester phosphodiesteraseQuickGO ontologyBLASTP
441504441824321hypothetical proteinBLASTP
4418394432151377UDP-sugar hydrolaseQuickGO ontologyBLASTP
443216443845630hypothetical proteinBLASTP
443845444615771n-acetylglucosamine catabolic proteinQuickGO ontologyBLASTP
444612445220609hypothetical proteinBLASTP
445233445883651membrane-associated proteinQuickGO ontologyBLASTP
445892446887996thioredoxin reductaseQuickGO ontologyBLASTP
447399448973157516S ribosomal RNAQuickGO ontologyBLASTP
44909844917275tRNA-IleQuickGO ontology
44922544929773tRNA-AlaQuickGO ontologyBLASTP
449427452323289723S ribosomal RNAQuickGO ontologyBLASTP
4523934525091175S ribosomal RNAQuickGO ontologyBLASTP
45251445258673tRNA-ValQuickGO ontologyBLASTP
45258945266173tRNA-LysQuickGO ontologyBLASTP
45267545275682tRNA-LeuQuickGO ontologyBLASTP
45278045285273tRNA-ThrQuickGO ontologyBLASTP
45286345293472tRNA-GlyQuickGO ontology
45294645303186tRNA-LeuQuickGO ontologyBLASTP
45304045311374tRNA-ArgQuickGO ontologyBLASTP
45311945319274tRNA-ProQuickGO ontology
45322245329574tRNA-MetQuickGO ontology
45330845338174tRNA-MetQuickGO ontologyBLASTP
45340945348274tRNA-MetQuickGO ontology
45348645355974tRNA-AspQuickGO ontologyBLASTP
45356645363873tRNA-PheQuickGO ontologyBLASTP
45365845372871tRNA-GlyQuickGO ontology
45373445380875tRNA-IleQuickGO ontology
45381145390090tRNA-SerQuickGO ontologyBLASTP
454069454491423mutator proteinQuickGO ontologyBLASTP
4544914573882898phage related helicaseQuickGO ontologyBLASTP
45761145768272tRNA-GluQuickGO ontologyBLASTP
45771845780487tRNA-SerQuickGO ontologyBLASTP
45781445788774tRNA-MetQuickGO ontology
45789145796474tRNA-AspQuickGO ontologyBLASTP
45797145804676tRNA-PheQuickGO ontologyBLASTP
45805145813282tRNA-TyrQuickGO ontologyBLASTP
45813745820771tRNA-TrpQuickGO ontology
45822045829576tRNA-HisQuickGO ontologyBLASTP
45830045837172tRNA-GlnQuickGO ontology
45839545846571tRNA-CysQuickGO ontology
45850645859085tRNA-LeuQuickGO ontologyBLASTP
4587124598751164glycosyltransferaseQuickGO ontologyBLASTP
4598894609321044glycosyltransferaseQuickGO ontologyBLASTP
4609324619571026integral membrane proteinQuickGO ontologyBLASTP
4620294640892061SulfataseQuickGO ontologyBLASTP
464157464390234preprotein translocase subunit SecGQuickGO ontologyBLASTP
4644614668032343exoribonuclease RQuickGO ontologyBLASTP
466816467274459SsrA-binding proteinQuickGO ontologyBLASTP
4674624688231362IS4 family transposaseQuickGO ontologyBLASTP
469566471140157516S ribosomal RNAQuickGO ontologyBLASTP
471149471334186hypothetical proteinBLASTP
471346474242289723S ribosomal RNAQuickGO ontologyBLASTP
4743124744281175S ribosomal RNAQuickGO ontologyBLASTP
47444247451473tRNA-AsnQuickGO ontology
4748524758621011PTS system mannose-specific IIAB componentQuickGO ontologyBLASTP
475881476693813PTS system mannose-specific transporter subunit IICQuickGO ontologyBLASTP
476722477642921PTS system mannose-specific IID componentQuickGO ontologyBLASTP
477646478014369hypothetical proteinBLASTP
4782544794801227transposaseQuickGO ontologyBLASTP
4797474811471401transposaseQuickGO ontologyBLASTP
481197482027831transcriptional regulatorQuickGO ontologyBLASTP