Pre_GI Gene

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Host: NC_013941 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013941:4470932 Escherichia coli O55:H7 str. CB9615 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The E. coli O55:H7 strain CB9615 was isolated from an infant with diarrhea in Germany in 2003 and confirmed to belong to the same sequence type (ST11) as the O157:H7 clone by multilocus sequence typing. The O55:H7 and O157:H7 E. coli clones have been shown to be closely related. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
447093244721851254CP4-like integraseQuickGO ontologyBLASTP
44722844472631348hypothetical proteinBLASTP
44728444473497654transposaseQuickGO ontologyBLASTP
44734944473658165hypothetical proteinBLASTP
44737484474122375hypothetical proteinBLASTP
44741194474610492hypothetical proteinBLASTP
44746044474819216hypothetical proteinBLASTP
44760814476314234hypothetical proteinBLASTP
44767494477513765espFQuickGO ontologyBLASTP
44775984477876279hypothetical proteinBLASTP
44778824478103222type III secretion apparatus needle proteinQuickGO ontologyBLASTP
44781394478546408hypothetical proteinBLASTP
44785534479491939Secreted protein EspBQuickGO ontologyBLASTP
447951244806361125secreted protein EspDQuickGO ontologyBLASTP
44806494481227579espAQuickGO ontologyBLASTP
448128644823411056SepLQuickGO ontologyBLASTP
448248444837041221PasQuickGO ontologyBLASTP
448396844867722805Gamma intiminQuickGO ontologyBLASTP
44868324487302471Tir chaperoneQuickGO ontologyBLASTP
448744044891101671translocated intimin receptor TirQuickGO ontologyBLASTP
44895344490145612hypothetical proteinBLASTP
44904114490794384hypothetical proteinBLASTP
44909924491498507hypothetical proteinBLASTP
44915294492446918sepQQuickGO ontologyBLASTP
44924094492825417hypothetical proteinBLASTP
44928184493195378hypothetical proteinBLASTP
449319844945381341escNQuickGO ontologyBLASTP
449452244965492028escVQuickGO ontologyBLASTP
44965464496899354hypothetical proteinBLASTP
44970844497383300SepZQuickGO ontologyBLASTP
44974164497844429hypothetical proteinBLASTP
44978474498419573EscJQuickGO ontologyBLASTP
44984254498880456hypothetical proteinBLASTP
449888045004181539escCQuickGO ontologyBLASTP
45004324500887456type III secretion low calcium response chaperone LcrHSycDQuickGO ontologyBLASTP
45012714501684414hypothetical proteinBLASTP
45017394502110372hypothetical proteinBLASTP
45022884502764477transglycosylase SLT domain proteinQuickGO ontologyBLASTP
450276145037981038secretion system apparatus protein SsaUQuickGO ontologyBLASTP
45037914504567777escTQuickGO ontologyBLASTP
45045674504839273EscSQuickGO ontologyBLASTP
45048364505489654type III secretion system EscR proteinQuickGO ontologyBLASTP
45054944506189696hypothetical proteinBLASTP
45061344506733600hypothetical proteinBLASTP
45067304507053324hypothetical proteinBLASTP
45070574507275219type III secretion system protein YseE familyQuickGO ontologyBLASTP
45072904507679390hypothetical proteinBLASTP
450891345101091197hypothetical proteinBLASTP
45102374511055819hypothetical proteinBLASTP
45113694511611243hypothetical proteinBLASTP
45118274512021195hypothetical proteinBLASTP
45120754512998924YicLQuickGO ontologyBLASTP
45130024513820819lipoprotein 28 precursorQuickGO ontologyBLASTP
45139734514335363hypothetical proteinBLASTP
451437645156141239major facilitator family transporterQuickGO ontologyBLASTP
45158004516153354hypothetical proteinBLASTP
45161374516460324DNA-binding proteinQuickGO ontologyBLASTP
45165764517055480hypothetical proteinBLASTP
451858945203551767adenine deaminaseQuickGO ontologyBLASTP
452040145217921392Hexose phosphate transport proteinQuickGO ontologyBLASTP