Pre_GI Gene

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Host: NC_013887 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013887:1601730 Methanocaldococcus sp. FS406-22 chromosome, complete genome

Host Lineage: Methanocaldococcus; Methanocaldococcus; Methanocaldococcaceae; Methanococcales; Euryarchaeota; Archaea

General Information: Isolation: Deep-sea hydrothermal vent from Pacific; Temp: Thermophile; Temp: 90C; Habitat: Deep sea, Hydrothermal vent, Marine. Methanocaldococcus sp. FS406-22 was isolated from hydrothermal vent fluid from an undersea volcano in the northeast Pacific Ocean. This organism is able to fix nitrogen at temperatures of 92 degrees C.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
160173016027881059Protein of unknown function DUF373QuickGO ontologyBLASTP
16028161603769954magnesium and cobalt transport protein CorAQuickGO ontologyBLASTP
16037791604042264Ribonucleoprotein complex SRP Srp19 componentQuickGO ontologyBLASTP
16040501604883834Methylenetetrahydromethanopterin dehydrogenaseQuickGO ontologyBLASTP
16052441605939696zinciron permeaseQuickGO ontologyBLASTP
160607616072811206tryptophan synthase beta subunitQuickGO ontologyBLASTP
16073131608152840tryptophan synthase alpha subunitQuickGO ontologyBLASTP
16083231608559237RNA polymerase Rpb5QuickGO ontologyBLASTP
160857416100611488RNA polymerase beta subunitQuickGO ontologyBLASTP
161015316120541902DNA-directed RNA polymerase subunit BQuickGO ontologyBLASTP
161211716147922676DNA-directed RNA polymerase subunit AQuickGO ontologyBLASTP
161484216160051164DNA-directed RNA polymerase subunit AQuickGO ontologyBLASTP
16163831616697315ribosomal protein L7AeL30eS12eGadd45QuickGO ontologyBLASTP
16166971617260564NusA family KH domain proteinQuickGO ontologyBLASTP
16173571617803447ribosomal protein S23 S12QuickGO ontologyBLASTP
16178611618436576ribosomal protein S7QuickGO ontologyBLASTP
161855216207322181translation elongation factor aEF-2QuickGO ontologyBLASTP
16208971621712816hypothetical proteinBLASTP
1621758162183679tRNA-MetQuickGO ontology
162194116232781338PhosphomannomutaseQuickGO ontologyBLASTP
16233841624205822predicted phospho-2-dehydro-3-deoxyheptonate aldolaseQuickGO ontologyBLASTP
16242991624499201hypothetical protein
16245081624825318hypothetical protein
16249831625846864protein of unknown function DUF52QuickGO ontologyBLASTP
16258761626082207conserved hypothetical cytosolic proteinQuickGO ontologyBLASTP
16260991626560462methanogenesis marker protein 5QuickGO ontologyBLASTP
16265781626964387hypothetical proteinBLASTP
16272201628122903PfkB domain proteinQuickGO ontologyBLASTP