Pre_GI Gene

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Host: NC_013316 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013316:4095905 Clostridium difficile R20291, complete genome

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
409590540972631359putative multidrug resistance proteinQuickGO ontologyBLASTP
40977474098163417hypothetical proteinBLASTP
40983204098937618hypothetical proteinBLASTP
409944141021462706putative collagen-binding surface proteinQuickGO ontologyBLASTP
41023714102694324conjugative transposon proteinQuickGO ontologyBLASTP
41037084104166459hypothetical proteinBLASTP
41041914104733543hypothetical proteinBLASTP
41047694105296528hypothetical proteinBLASTP
410540641068001395putative conjugative transposon FtsK_SpoIIIE-related proteinQuickGO ontologyBLASTP
410708041082011122putative conjugative transposon replication initiation factorQuickGO ontologyBLASTP
41083434108564222conjugative transposon proteinQuickGO ontologyBLASTP
41088784109522645chloramphenicol o-acetyltransferaseQuickGO ontologyBLASTP
41098084110305498conjugative transposon proteinQuickGO ontologyBLASTP
41103214110824504conjugative tranposon proteinQuickGO ontologyBLASTP
411131341137452433conjugative transposon proteinQuickGO ontologyBLASTP
411374541158802136conjugative transposon proteinQuickGO ontologyBLASTP
411587741168841008putative cell wall hydrolaseQuickGO ontologyBLASTP
41169004117793894conjugative transposon proteinQuickGO ontologyBLASTP
41180064118863858hypothetical proteinBLASTP
41189354119522588transcriptional regulator tetr familyQuickGO ontologyBLASTP
41195514120471921abc transporter atp-binding proteinQuickGO ontologyBLASTP
41204684121151684putative abc transporter permease protein putative abc transporter permease proteinQuickGO ontologyBLASTP
41211484121846699putative abc transporter permease proteinQuickGO ontologyBLASTP
41218584122769912hypothetical proteinBLASTP
41236504124078429hypothetical proteinBLASTP
412419341253741182integraseQuickGO ontologyBLASTP
41257144126526813MerR-family transcriptional regulatorQuickGO ontologyBLASTP
412660241299963395putative nah exchangerQuickGO ontology
412798541291031119transposase-like protein bQuickGO ontologyBLASTP