Pre_GI Gene

Some Help

Host: NC_013315 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013315:1123733 Clostridium difficile CD196 chromosome, complete genome

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from a single patient with pseudomembranous colitis in a Paris hospital in 1985. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
11237331124533801inorganic polyphosphateATP-NAD kinaseQuickGO ontologyBLASTP
11246351125540906ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
11255281126214687ABC transporter permeaseQuickGO ontologyBLASTP
11262661126808543hypothetical proteinBLASTP
11268871127354468regulatory proteinQuickGO ontologyBLASTP
112806211291981137butyryl-CoA dehydrogenaseQuickGO ontologyBLASTP
11292421130039798electron transfer flavoprotein subunit betaQuickGO ontologyBLASTP
113005811310681011electron transfer flavoprotein subunit alphaQuickGO ontologyBLASTP
113108711318847983-hydroxybutyryl-CoA dehydrataseQuickGO ontologyBLASTP
113198211328278463-hydroxybutyryl-CoA dehydrogenaseQuickGO ontologyBLASTP
113289911340891191acetyl-CoA acetyltransferaseQuickGO ontologyBLASTP
11343411135186846pseudouridylate synthaseQuickGO ontologyBLASTP
113520011362041005hypothetical proteinBLASTP
11363481136575228acyl carrier proteinQuickGO ontologyBLASTP
11367471137172426hypothetical proteinBLASTP
11372201137426207hypothetical protein
11376081137787180hypothetical proteinBLASTP
11378211138021201hypothetical proteinBLASTP
113826811392901023LacI family transcriptional regulatorQuickGO ontologyBLASTP
11394131139853441hypothetical proteinBLASTP
11400231140928906hypothetical proteinBLASTP
114140611426231218hypothetical proteinBLASTP