Pre_GI Gene

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Host: NC_012988 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012988:4075429 Methylobacterium extorquens DM4, complete genome

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Methylobacterium extorquens DM4 was isolated from soil contaminated with halogenated (chlorine-containing) hydrocarbons. This organism is able to use dichloromethane as a sole carbon and energy source. Dichloromethane, an industrial solvent, is toxic and carcinogenic. This compound is water soluble and can easily contaminate groundwater. Methylobacterium chloromethanicum was isolated from soil at a petrochemical factory in Tatarstan, Russia. This organism is able to grow using chloromethane as the sole carbon and energy source.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
40745514075432882alkanesulfonate ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
40754294076304876ABC transporterQuickGO ontologyBLASTP
407630140777431443ABC transporter substrate-binding proteinQuickGO ontologyBLASTP
40780804078844765CrpFnr family transcriptional regulatorQuickGO ontologyBLASTP
40788824079862981hypothetical proteinBLASTP
40798594080092234ferredoxinQuickGO ontologyBLASTP
408010740818701764succinate dehydrogenase flavoprotein subunitQuickGO ontologyBLASTP
40818674082190324hypothetical proteinBLASTP
40827274082906180hypothetical proteinBLASTP
408331240853392028diguanylate cyclaseQuickGO ontologyBLASTP
40854084085578171hypothetical protein
408575040867751026hypothetical proteinBLASTP
4086871408695181
40869964087184189BLASTP
40874164087739324elongation factor GreAGreB familyQuickGO ontologyBLASTP
40887244089209486hypothetical proteinBLASTP
40895044089734231hypothetical proteinBLASTP
40900354090238204hypothetical proteinBLASTP
40902774090621345hypothetical proteinBLASTP
40906674090969303hypothetical proteinBLASTP
40910854091312228hypothetical protein
409133840933351998sensor hybrid histidine kinase with multiple PAS and response regulator receiver domainsQuickGO ontologyBLASTP
40934164093715300BLASTP
40938784094081204hypothetical protein
40944174095379963LysR family transcriptional regulatorQuickGO ontologyBLASTP
40956824096161480BLASTP
40962344096875642BLASTP
40970014097876876branched-chain amino acid ABC transporter permeaseQuickGO ontologyBLASTP
409787340996541782branched chain amino acid ABC transporter ATPasepermeaseQuickGO ontologyBLASTP
40996544100391738branched-chain amino acid ABC transporter ATPaseQuickGO ontologyBLASTP