Pre_GI Gene

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Host: NC_012660 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012660:1579204 Pseudomonas fluorescens SBW25 chromosome, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
157920415808261623putative methyl-accepting chemotaxis proteinQuickGO ontologyBLASTP
15810891581448360putative lipoproteinQuickGO ontology
158150415826161113putative hydrataseisomerase proteinQuickGO ontologyBLASTP
15827531583445693uracil-DNA glycosylaseQuickGO ontologyBLASTP
158359815855591962hypothetical proteinBLASTP
158587215878932022hypothetical proteinBLASTP
158813515903872253hypothetical proteinBLASTP
159091415940753162hypothetical proteinBLASTP
159424415952721029putative membrane-associated monoxygenaseQuickGO ontologyBLASTP
159526515967791515putative transporter-like membrane proteinQuickGO ontologyBLASTP
15967811597317537putative transporter-like membrane proteinQuickGO ontologyBLASTP
15973691598352984putative transporter-like exported proteinQuickGO ontologyBLASTP
159838615996781293hypothetical proteinBLASTP
15999141600585672two component system response regulatorQuickGO ontologyBLASTP
160057816019631386putative two-component system sensor kinaseQuickGO ontologyBLASTP
16019641602785822hypothetical proteinBLASTP
16028221603763942hypothetical proteinBLASTP
16039041604158255hypothetical proteinBLASTP
16041421604588447hypothetical proteinBLASTP
16045571604748192BLASTP
160479216062341443putative phage integraseQuickGO ontologyBLASTP
16064251606847423hypothetical protein
16075611608328768hypothetical proteinBLASTP
16083251608504180hypothetical protein
16085011608791291hypothetical protein
16088791609415537hypothetical protein
160945416104971044hypothetical proteinBLASTP
161102816126321605L-aspartate oxidaseQuickGO ontologyBLASTP
16130971613678582RNA polymerase sigma factor AlgUQuickGO ontologyBLASTP
16137111614298588sigma factor negative regulatory proteinQuickGO ontologyBLASTP
16143141615276963sigma factor regulatory proteinQuickGO ontologyBLASTP
161551116169471437putative exported heat-shock adaptation serine proteaseQuickGO ontologyBLASTP
161701316184461434putative peptidaseQuickGO ontologyBLASTP
16185421618781240putative SirA-like proteinQuickGO ontologyBLASTP
161881316198831071putative permeaseQuickGO ontologyBLASTP
16200471620520474putative redox-like proteinQuickGO ontologyBLASTP
16205321621092561putative regulatory proteinQuickGO ontologyBLASTP