Pre_GI Gene

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Host: NC_012580 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012580:301500 Vibrio cholerae M66-2 chromosome II, complete sequence

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae M66-2 was isolated from the 1937 cholera outbreak in the Makassar area of Indonesia. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
3016543028111158integraseQuickGO ontologyBLASTP
302857303837981ISVch5 transposaseQuickGO ontologyBLASTP
3041133053481236hypothetical proteinBLASTP
305869306399531hypothetical proteinBLASTP
306399307070672hypothetical proteinBLASTP
307072307422351hypothetical proteinBLASTP
3076913096191929threonyl-tRNA synthetaseQuickGO ontologyBLASTP
309785310174390initiation factor IF3QuickGO ontologyBLASTP
31027831047219550S ribosomal protein L35QuickGO ontologyBLASTP
31051431086735450S ribosomal protein L20QuickGO ontologyBLASTP
310949311911963site-specific recombinase IntI4QuickGO ontologyBLASTP
312157312549393hypothetical proteinBLASTP
312669313064396hypothetical proteinBLASTP
313730314089360Glyoxalasebleomycin resistance proteinQuickGO ontologyBLASTP
314221314709489OsmC-like proteinQuickGO ontologyBLASTP
314828314989162hypothetical proteinBLASTP
315406315654249hypothetical proteinBLASTP
3158513169691119hypothetical proteinBLASTP
317111317587477N-acetyltransferase GCN5QuickGO ontologyBLASTP
317764317898135hypothetical proteinBLASTP
317883318062180hypothetical proteinBLASTP
318250318771522N-acetyltransferase GCN5QuickGO ontologyBLASTP
318907319422516Lipocalin-like proteinQuickGO ontologyBLASTP
319559320101543hypothetical proteinBLASTP
320220320381162hypothetical proteinBLASTP
320893321045153hypothetical proteinBLASTP
321245321523279plasmid stabilization system proteinQuickGO ontologyBLASTP
321520321840321relB proteinQuickGO ontologyBLASTP
321980322279300plasmid stabilization element ParEQuickGO ontologyBLASTP
322266322589324hypothetical proteinBLASTP
324264324692429N-acetyltransferase GCN5QuickGO ontologyBLASTP
325280325762483N-acetyltransferase GCN5QuickGO ontologyBLASTP
326564326839276hypothetical proteinBLASTP
326833327354522hypothetical proteinBLASTP
327493328329837hypothetical protein
328494329132639Metal-dependent phosphohydrolase with HD region subdomainQuickGO ontologyBLASTP
329403329624222hypothetical proteinBLASTP
329944330264321hypothetical proteinBLASTP
330261330794534N-acetyltransferase GCN5QuickGO ontologyBLASTP
330987331310324hypothetical proteinBLASTP
331711331935225hypothetical proteinBLASTP
332186332458273hypothetical proteinBLASTP
332628333062435hypothetical proteinBLASTP
333195333710516hypothetical proteinBLASTP
333851334288438NUDIX hydrolaseQuickGO ontologyBLASTP
334449334796348hypothetical proteinBLASTP
3349373365021566hypothetical proteinBLASTP
336638337198561hypothetical proteinBLASTP
337348338022675hypothetical protein
338253338501249hypothetical proteinBLASTP
338716339468753short-chain dehydrogenaseQuickGO ontologyBLASTP
339770339952183hypothetical proteinBLASTP
340130340534405hypothetical proteinBLASTP
340830341012183hypothetical proteinBLASTP