Pre_GI Gene

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Host: NC_012560 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012560:2348202 Azotobacter vinelandii DJ, complete genome

Host Lineage: Azotobacter vinelandii; Azotobacter; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism was first isolated from the soil in Vineland, New Jersey, although it is found worldwide. It is a large obligate aerobe that has one of the highest respiratory rates of any organism. Azotobacter vinelandii also produces a number of unusual nitrogenases which allow it to fix atmospheric nitrogen to ammonia, a compound it can then use as a nitrogen source. It protects the oxygen-sensitive nitrogenase enzymes through its high respiratory rate, which sequesters the nitrogenase complexes in an anoxic environment. This organism has a number of unusual characteristics. Under extreme environmental conditions, the cell will produce a cyst that is resistant to dessication and is surrounded by two capsular polysaccharide layers. This organism produces two industrially important polysaccharides, poly-beta-hydroxybutyrate (PHB) and alginate. PHB is a thermoplastic biopolymer, and alginate is used in the food industry. Alginate is also used by the pathogen Pseudomonas aeruginosa to infect the lungs of cystic fibrosis patients.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
234820223508112610Aconitate hydratase 2QuickGO ontologyBLASTP
23511932351669477hypothetical proteinBLASTP
23519292352348420tRNA-hydroxylaseQuickGO ontologyBLASTP
23525022353227726UDP-23-diacylglucosamine hydrolaseQuickGO ontologyBLASTP
23532332353727495peptidylprolyl isomeraseQuickGO ontologyBLASTP
235388423555511668glutaminyl-tRNA synthetaseQuickGO ontologyBLASTP
235555223569371386cysteinyl-tRNA synthetaseQuickGO ontologyBLASTP
23570292357883855methenyltetrahydrofolate cyclohydrolaseQuickGO ontologyBLASTP
2358262235833473tRNA-HisQuickGO ontology
2358400235848182tRNA-LeuQuickGO ontologyBLASTP
235861523599251311trigger factorQuickGO ontologyBLASTP
23599972360239243hypothetical proteinBLASTP
23600152360650636Peptidase S14 ClpPQuickGO ontologyBLASTP
236075323620331281ATP-dependent Clp protease ATP binding subunit ClpXQuickGO ontologyBLASTP
236216323645562394Peptidase S16 ATP-dependent proteaseQuickGO ontologyBLASTP
23646922364964273histone-like bacterial DNA-binding proteinQuickGO ontologyBLASTP
2365066236515590hypothetical proteinBLASTP
236518823670621875PpiC-type peptidyl-prolyl cis-trans isomeraseQuickGO ontologyBLASTP
236722923689321704PHB synthaseQuickGO ontologyBLASTP
236917823703561179polyhydroxybutyrate biosynthetic beta-ketothiolaseQuickGO ontologyBLASTP
23704192371162744Acetoacetl-CoA reductase in PHB biosynthesisQuickGO ontologyBLASTP
237167523727211047Transcription activator in PHB biosynthesis AraC familyQuickGO ontologyBLASTP
23730802373640561phasin proteinQuickGO ontologyBLASTP
23737012374225525polyhydroxyalkanoate synthesis regulatorQuickGO ontologyBLASTP
23743872374932546GTP cyclohydrolase IQuickGO ontologyBLASTP
23750242375584561mutS-related proteinQuickGO ontologyBLASTP
23756372375849213hypothetical proteinBLASTP
23760712376664594Isochorismatase hydrolase proteinQuickGO ontologyBLASTP
23769972377917921Modification methylaseQuickGO ontologyBLASTP
23779472378900954hydrolase alphabeta fold familyQuickGO ontologyBLASTP
2380101238019393hypothetical proteinBLASTP
238028823813521065MFS metabolite transporterQuickGO ontologyBLASTP
23813492381969621pentulose-5-phosphate-4-epimerase-related proteinQuickGO ontologyBLASTP
23820302382575546Acireductone dioxygenase ARDQuickGO ontologyBLASTP
2382578238326168423-diketo-5-methylthio-1-phosphopentane phosphataseQuickGO ontologyBLASTP