Pre_GI Gene

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Host: NC_012029 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012029:45462 Halorubrum lacusprofundi ATCC 49239 chromosome 1, complete genome

Host Lineage: Halorubrum lacusprofundi; Halorubrum; Halobacteriaceae; Halobacteriales; Euryarchaeota; Archaea

General Information: Formerly Halobacterium lacusprofundi, this organism is an extremely halophilic archaeon isolated from Deep Lake, Antarctica. Extremely halophilic archaeon isolated from the Antarctic. Halorubrum lacusprofundi is a red pigmented halophilic archaeon which has been found in hypersaline marine enviornments. Originally thought to be a psychrophile, further research determined that the optimum temperature for growth for Halorubrum lacusprofundi was from 31 - 37 degrees C.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
4546246442981ROK family proteinQuickGO ontologyBLASTP
4656447019456UspA domain proteinQuickGO ontologyBLASTP
4716847536369hypothetical proteinBLASTP
47675487691095hypothetical protein
4899149305315ferredoxinQuickGO ontologyBLASTP
4949449688195cold-shock DNA-binding domain proteinQuickGO ontologyBLASTP
4990250417516hypothetical proteinBLASTP
5048750792306hypothetical protein
5089851791894hypothetical protein
5184152593753inositol monophosphataseQuickGO ontologyBLASTP
5264953089441hypothetical protein
53180543521173transposase IS4 family proteinQuickGO ontologyBLASTP
5503155651621Late embryogenesis abundant proteinQuickGO ontology
562815635474tRNA-PheQuickGO ontology
566925676271tRNA-ProQuickGO ontology
56851589052055DEADDEAH box helicase domain proteinQuickGO ontologyBLASTP
5902259552531ribosomal protein L16QuickGO ontologyBLASTP
5969760437741protein of unknown function DUF91QuickGO ontologyBLASTP
60774620631290adenosylhomocysteinaseQuickGO ontologyBLASTP
62166635481383hypothetical proteinBLASTP
64231655651335amidohydrolaseQuickGO ontologyBLASTP