Pre_GI Gene

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Host: NC_011094 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011094:2913500 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
29135652914482918periplasmic chelated iron-binding protein YfeAQuickGO ontologyBLASTP
29144792915300822chelated iron transport system membrane protein YfeBQuickGO ontologyBLASTP
29152972916157861chelated iron transport system membrane protein YfeCQuickGO ontologyBLASTP
29161482916996849chelated iron transport system membrane protein YfeDQuickGO ontologyBLASTP
29170952917961867secreted effector proteinQuickGO ontologyBLASTP
29181642918919756transcriptional regulatorQuickGO ontologyBLASTP
29193042920191888transcriptional regulator AraC family proteinQuickGO ontologyBLASTP
29205352920987453hypothetical proteinBLASTP
29210032921674672invasion protein OrgBQuickGO ontologyBLASTP
29216312922209579type III secretion apparatus protein OrgAMxiKQuickGO ontologyBLASTP
29222022922960759type III secretion apparatus lipoprotein YscJHrcJ family proteinQuickGO ontologyBLASTP
29229572923262306protein PrgJQuickGO ontologyBLASTP
29232812923523243type III secretion apparatus needle proteinQuickGO ontologyBLASTP
292354829247261179type III secretion apparatus protein PrgHEprHQuickGO ontologyBLASTP
29250422925971930transcriptional regulator HilDQuickGO ontologyBLASTP
292706129287221662invasion protein regulatorQuickGO ontologyBLASTP
29287402929222483invasion protein IagBQuickGO ontologyBLASTP
292927629308831608effector protein SptPQuickGO ontologyBLASTP
29308942931286393secretion chaperoneQuickGO ontologyBLASTP
29313132931537225hypothetical proteinBLASTP
29316172931865249acyl carrier proteinQuickGO ontologyBLASTP
293188429338962013cell invasion protein SipAQuickGO ontologyBLASTP
293396029349821023type III effector protein IpaDSipDSspDQuickGO ontologyBLASTP
293505329362821230cell invasion protein SipCQuickGO ontologyBLASTP
293631029380911782cell invasion protein SipBQuickGO ontologyBLASTP
29380942938591498type III secretion low calcium response chaperone LcrHSycDQuickGO ontologyBLASTP
293872929397991071surface presentation of antigens protein SpaSQuickGO ontologyBLASTP
29397862940577792type III secretion apparatus protein SpaRYscTHrcTQuickGO ontologyBLASTP
29405812940841261protein EpaQQuickGO ontologyBLASTP
29408672941541675surface presentation of antigens protein SpaPQuickGO ontologyBLASTP
29415312942442912surface presentation of antigens protein SpaOQuickGO ontologyBLASTP
294244229434521011antigen presentation protein SpaNQuickGO ontologyBLASTP
29434522943895444virulence-associated secretory proteinQuickGO ontologyBLASTP
294387329451681296ATP synthase SpaLQuickGO ontologyBLASTP
29451652945572408surface presentation of antigens protein SpaKQuickGO ontologyBLASTP
294559629476532058invasion protein InvAQuickGO ontologyBLASTP
294767829487961119invasion protein InvEQuickGO ontologyBLASTP
294879329504811689type III secretion outer membrane poreQuickGO ontologyBLASTP
29504782951227750invasion proteinQuickGO ontologyBLASTP
29513262951439114hypothetical protein
29515852952028444cell adheranceinvasion proteinQuickGO ontologyBLASTP
29534562953680225transposaseQuickGO ontologyBLASTP
29541082954764657serinethreonine-specific protein phosphatase 2QuickGO ontologyBLASTP
29549362955457522hypothetical proteinBLASTP
295561629581832568DNA mismatch repair protein MutSQuickGO ontologyBLASTP
29582392958619381hypothetical proteinBLASTP
295861629598241209major facilitator family transporter proteinQuickGO ontologyBLASTP
29599332960844912transcriptional regulator LysR family proteinQuickGO ontologyBLASTP
296088629623821497GntP proteinQuickGO ontologyBLASTP
29623792963329951NAD-dependent epimerasedehydrataseQuickGO ontologyBLASTP