Pre_GI Gene

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Host: NC_011002 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011002:703194 Burkholderia cenocepacia J2315 chromosome 3, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain is the index strain for transmission among CF patients in the UK. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
7031947051611968PAP2 superfamily proteinQuickGO ontologyBLASTP
705916706686771BLASTP
707525708413889BLASTP
709760710110351putative DNA-binding proteinQuickGO ontologyBLASTP
710179710628450hypothetical proteinBLASTP
710742711236495hypothetical proteinBLASTP
711610712497888putative transposaseQuickGO ontologyBLASTP
71245571255399BLASTP
712819712959141BLASTP
7133797144041026putative transposaseQuickGO ontologyBLASTP
7146187156461029putative transposaseQuickGO ontologyBLASTP
715643716416774putative IstB-like ATP binding proteinQuickGO ontologyBLASTP
716687717574888putative transposaseQuickGO ontologyBLASTP
717606718537932BLASTP
718897719202306BLASTP
719199719606408putative transposaseQuickGO ontologyBLASTP
719764720060297putative H-NS family DNA-binding proteinQuickGO ontologyBLASTP
720082720291210hypothetical proteinBLASTP
720304720507204hypothetical protein
720572721036465hypothetical protein
7211947224651272hypothetical proteinBLASTP
722533723135603hypothetical proteinBLASTP
723328723753426hypothetical proteinBLASTP
723823724347525hypothetical proteinBLASTP
7243577286044248RHS-family proteinQuickGO ontologyBLASTP
728626729084459hypothetical proteinBLASTP
729150729593444hypothetical protein
729637730506870putative ankyrin-repeat exported proteinQuickGO ontologyBLASTP
7305067335053000hypothetical proteinBLASTP
7336537355331881hypothetical proteinBLASTP
736113736568456hypothetical protein
736924737667744hypothetical proteinBLASTP
738025738756732hypothetical proteinBLASTP
7392467408051560hypothetical protein
741394741831438hypothetical proteinBLASTP
742337743050714hypothetical protein
743063743749687hypothetical protein
743760744548789hypothetical protein
744788745204417hypothetical protein
745286746203918hypothetical proteinBLASTP
746400746747348hypothetical proteinBLASTP
747059747586528conserved hypothetical IS element proteinQuickGO ontologyBLASTP
747564748433870putative TniB-like transposition proteinQuickGO ontologyBLASTP
7494727504971026putative transposaseQuickGO ontologyBLASTP
752396752794399hypothetical proteinBLASTP
752926753657732hypothetical protein
754095754643549TetR family regulatory proteinQuickGO ontologyBLASTP