Pre_GI Gene

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Host: NC_011002 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011002:564654 Burkholderia cenocepacia J2315 chromosome 3, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain is the index strain for transmission among CF patients in the UK. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
564654565142489benzoate 12-dioxygenase beta subunitQuickGO ontologyBLASTP
5651395664971359benzoate 12-dioxygenase alpha subunitQuickGO ontologyBLASTP
566615567556942catechol 12-dioxygenase 2QuickGO ontologyBLASTP
5676085687441137muconate cycloisomerase I 2QuickGO ontologyBLASTP
569292569735444putative exported monooxygenaseQuickGO ontologyBLASTP
5698355708601026putative aldoketo reductase family proteinQuickGO ontologyBLASTP
570994571293300hypothetical proteinBLASTP
571290571850561putative flavodoxin proteinQuickGO ontologyBLASTP
572009572965957LysR family regulatory proteinQuickGO ontologyBLASTP
5733665744991134putative phage transmembrane acetyltransferaseQuickGO ontologyBLASTP
5747005770572358hypothetical proteinBLASTP
577057577638582putative phage tail protein gpIQuickGO ontologyBLASTP
5776315787821152putative phage baseplate assembly protein gpJQuickGO ontologyBLASTP
578779579132354putative phage baseplate protein gpWQuickGO ontologyBLASTP
579186579788603putative phage baseplate assembly protein gpVQuickGO ontologyBLASTP
5797855809901206hypothetical proteinBLASTP
580978581187210putative phage tail protein gpXQuickGO ontologyBLASTP
581187582077891hypothetical proteinBLASTP
5820795846192541putative phage tail proteinQuickGO ontologyBLASTP
584592584978387hypothetical protein
584894585097204putative Lambda G-pre-tape measure frameshift proteinQuickGO ontology
585024585353330hypothetical proteinBLASTP