Pre_GI Gene

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Host: NC_010572 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010572:8493946 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
90827911884hypothetical proteinBLASTP
34013919519hypothetical proteinBLASTP
40424353312hypothetical proteinBLASTP
44415283843putative DNA-binding proteinQuickGO ontologyBLASTP
52805813534hypothetical proteinBLASTP
58166055240hypothetical proteinBLASTP
71127642531hypothetical proteinBLASTP
7722141386417hypothetical proteinBLASTP
84939468494725780putative short chain dehydrogenaseQuickGO ontologyBLASTP
84947628495172411hypothetical proteinBLASTP
84952138495599387hypothetical protein
849562684976021977hypothetical proteinBLASTP
84992258499758534hypothetical proteinBLASTP
84999628500291330hypothetical proteinBLASTP
85004868501340855hypothetical proteinBLASTP
850133785033011965hypothetical protein with SsgA-like domainQuickGO ontologyBLASTP
85035568503666111hypothetical proteinBLASTP
85037648504342579hypothetical proteinBLASTP
85044118504572162hypothetical proteinBLASTP
85045698504715147hypothetical proteinBLASTP
85053518505779429hypothetical proteinBLASTP
85063688506727360hypothetical proteinBLASTP
85067838507382600hypothetical proteinBLASTP
85073928508267876putative Tra3-like proteinQuickGO ontologyBLASTP
85084568509223768hypothetical proteinBLASTP
85093028510297996hypothetical proteinBLASTP
85100658510949885hypothetical proteinBLASTP
85112548511505252hypothetical proteinBLASTP
85116138512206594putative nicotinamidaseQuickGO ontologyBLASTP
85124078512706300putative transposaseQuickGO ontologyBLASTP
85127038513605903putative transposaseQuickGO ontologyBLASTP
851391285153181407hypothetical proteinBLASTP
85158438516592750putative transposaseQuickGO ontologyBLASTP
85167578517545789hypothetical proteinBLASTP
85179118518186276putative transposaseQuickGO ontologyBLASTP
85181838518650468putative transposaseQuickGO ontologyBLASTP
85185988518981384hypothetical proteinBLASTP
85189788519433456hypothetical proteinBLASTP
851957285207501179hypothetical proteinBLASTP
85208548521117264putative transcriptional regulatorQuickGO ontologyBLASTP
85212518522138888hypothetical proteinBLASTP
852222185236901470putative DNA helicaseQuickGO ontologyBLASTP
85241978524391195hypothetical proteinBLASTP
85244188524798381hypothetical proteinBLASTP
852529785264301134putative transposaseQuickGO ontologyBLASTP
85264618526832372hypothetical proteinBLASTP
85268608527591732putative MerR-family transcriptional regulatorQuickGO ontologyBLASTP
852809885316403543hypothetical proteinBLASTP
853179285382086417hypothetical proteinBLASTP
85382888538818531hypothetical proteinBLASTP
85398758540114240hypothetical proteinBLASTP
85401178540650534hypothetical proteinBLASTP
85406478541489843putative DNA-binding proteinQuickGO ontologyBLASTP
85415778541888312hypothetical proteinBLASTP
85420118542529519hypothetical proteinBLASTP
854313985450221884hypothetical proteinBLASTP