Pre_GI Gene

Some Help

Host: NC_010498 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010498:1995500 Escherichia coli SMS-3-5, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
19956341996329696septum site-determining protein MinCQuickGO ontologyBLASTP
19963531997165813septum site-determining protein MinDQuickGO ontologyBLASTP
19971691997435267cell division topological specificity factor MinEQuickGO ontologyBLASTP
19978021998128327hypothetical proteinBLASTP
19985461998719174hypothetical proteinBLASTP
19987211999065345hypothetical proteinBLASTP
19990751999404330hypothetical proteinBLASTP
199946220017832322autotransporter AT family porinQuickGO ontologyBLASTP
20022742002393120hypothetical proteinBLASTP
20025102002728219hypothetical proteinBLASTP
200286020043201461cyclic diguanylate phosphodiesterase domain-containing proteinQuickGO ontologyBLASTP
20047152004891177hypothetical proteinBLASTP
20050762005342267hypothetical proteinBLASTP
200623620074471212BLUFcyclic diguanylate phosphodiesterase domain-containing proteinQuickGO ontologyBLASTP
20076522008383732transcriptional regulator mlrAQuickGO ontologyBLASTP
20086042009008405hypothetical proteinBLASTP
201013720113871251isocitrate dehydrogenase NADP-dependentQuickGO ontologyBLASTP
20115892012212624ribosomal large subunit pseudouridine synthase EQuickGO ontologyBLASTP
20122222012683462NUDIX family hydrolaseQuickGO ontologyBLASTP
201273720138431107tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferaseQuickGO ontologyBLASTP
20138792014520642hypothetical proteinBLASTP
201452420158941371adenylosuccinate lyaseQuickGO ontologyBLASTP
20160632016734672DNA-binding response regulator PhoPQuickGO ontologyBLASTP
201673420181941461sensor histidine kinase PhoQQuickGO ontologyBLASTP
201827020193911122cupin family proteinQuickGO ontologyBLASTP
201944020207081269peptidase TQuickGO ontologyBLASTP
20206862020937252hypothetical proteinBLASTP
202091620220521137spermidineputrescine ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
20220362022893858spermidineputrescine ABC transporter permease protein PotBQuickGO ontologyBLASTP
20228902023684795spermidineputrescine ABC transporter permease protein PotCQuickGO ontologyBLASTP
202368120247271047spermidineputrescine ABC transporter periplasmic spermidineputrescine-binding proteinQuickGO ontologyBLASTP