Pre_GI Gene

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Host: NC_010498 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010498:1035406 Escherichia coli SMS-3-5, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
103540610368841479polysaccharide biosynthesis protein WzxCQuickGO ontologyBLASTP
103695610382361281colanic acid biosynthesis protein WcaKQuickGO ontologyBLASTP
103823310394531221colanic acid biosynthesis glycosyl transferase WcaLQuickGO ontologyBLASTP
103946410408581395colanic acid biosynthesis protein WcaMQuickGO ontologyBLASTP
10410161042011996UDP-N-acetylglucosamine 4-epimeraseQuickGO ontologyBLASTP
10422541043147894regulatory protein GalFQuickGO ontologyBLASTP
10434571044278822glycosyl transferase group 2QuickGO ontologyBLASTP
104428010460461767hypothetical proteinBLASTP
10460501046922873glycosyl transferase group 2QuickGO ontologyBLASTP
104692210481001179hypothetical protein
104805110490761026glycosyl transferase group 1QuickGO ontologyBLASTP
104905710502351179putative polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
10502581050698441hypothetical protein
10507201050932213IS1 transposase orfAQuickGO ontologyBLASTP
10509431051446504IS1 transposase orfBQuickGO ontologyBLASTP
1051833105323914076-phosphogluconate dehydrogenase decarboxylatingQuickGO ontologyBLASTP
105348710546531167UDP-glucose 6-dehydrogenaseQuickGO ontologyBLASTP
10547991055779981chain length determinant proteinQuickGO ontologyBLASTP
10558751056486612phosphoribosyl-AMP cyclohydrolasephosphoribosyl-ATP pyrophosphataseQuickGO ontologyBLASTP
10564801057256777imidazoleglycerol phosphate synthase cyclase subunitQuickGO ontologyBLASTP
10572381057975738phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomeraseQuickGO ontologyBLASTP
10579751058565591imidazole glycerol phosphate synthase glutamine amidotransferase subunitQuickGO ontologyBLASTP
105856510596321068histidinol-phosphataseimidazoleglycerol- phosphate dehydrataseQuickGO ontologyBLASTP
105963210607021071histidinol-phosphate aminotransferaseQuickGO ontologyBLASTP
106069910620031305histidinol dehydrogenaseQuickGO ontologyBLASTP
10620091062908900ATP phosphoribosyltransferaseQuickGO ontologyBLASTP