Pre_GI Gene

Some Help

Host: NC_010334 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010334:609636 Shewanella halifaxensis HAW-EB4, complete genome

Host Lineage: Shewanella halifaxensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment in a munitions-dumping area of the Emerald Basin (depth of 215 m, Atlantic Ocean), offshore of Halifax Harbour (Nova Scotia, Canada). It is capable of efficiently degrading RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine), an explosive compound that contaminates the environment. This bacterium is an obligate respiratory organism.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
6096366107091074secretion protein HlyD family proteinQuickGO ontologyBLASTP
6107096122981590drug resistance transporter EmrBQacA subfamilyQuickGO ontologyBLASTP
612455612913459GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
612991613242252hypothetical protein
613404613520117hypothetical proteinBLASTP
6136386150471410phage integrase family proteinQuickGO ontologyBLASTP
6150406185583519integrase family proteinQuickGO ontologyBLASTP
618555619193639hypothetical proteinBLASTP
619550619957408hypothetical protein
620220621074855RNA-directed DNA polymerase Reverse transcriptaseQuickGO ontologyBLASTP
621748622620873hypothetical proteinBLASTP
6227646240561293hypothetical proteinBLASTP
6242056253471143RNA-directed DNA polymeraseQuickGO ontologyBLASTP
625443625997555hypothetical proteinBLASTP
626708626914207transcriptional regulator XRE familyQuickGO ontologyBLASTP
627047627586540hypothetical proteinBLASTP
6275916290001410type III restriction protein res subunitQuickGO ontologyBLASTP
6291026322333132ATPase involved in DNA repair-like proteinQuickGO ontologyBLASTP
632223632762540hypothetical proteinBLASTP
6327466340891344hypothetical proteinBLASTP
6340676351221056hypothetical proteinBLASTP
635495636106612hypothetical proteinBLASTP
6361946374111218hypothetical proteinBLASTP