Pre_GI Gene

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Host: NC_010334 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010334:3224009 Shewanella halifaxensis HAW-EB4, complete genome

Host Lineage: Shewanella halifaxensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment in a munitions-dumping area of the Emerald Basin (depth of 215 m, Atlantic Ocean), offshore of Halifax Harbour (Nova Scotia, Canada). It is capable of efficiently degrading RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine), an explosive compound that contaminates the environment. This bacterium is an obligate respiratory organism.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
322400932251631155major facilitator superfamily MFS_1QuickGO ontologyBLASTP
322516332262571095Chorismate synthaseQuickGO ontologyBLASTP
32264073227351945modification methylase HemK familyQuickGO ontologyBLASTP
32274313227961531Smr proteinMutS2QuickGO ontologyBLASTP
32280573228527471phosphohistidine phosphatase SixAQuickGO ontologyBLASTP
322888432316732790peptidase M16 domain proteinQuickGO ontologyBLASTP
323197932362654287diguanylate cyclasephosphodiesterase with PASPAC sensorsQuickGO ontologyBLASTP
323636432375601197hypothetical proteinBLASTP
32375763237692117BLASTP
32377243237840117hypothetical proteinBLASTP
32379763238176201hypothetical proteinBLASTP
323843032405562127fatty acid oxidation complex alpha subunit FadJQuickGO ontologyBLASTP
324056132418711311acetyl-CoA C-acyltransferase FadIQuickGO ontologyBLASTP
32422883243244957ATPase associated with various cellular activities AAA_3QuickGO ontologyBLASTP
32432443244173930protein of unknown function DUF58QuickGO ontologyBLASTP