Pre_GI Gene

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Host: NC_010334 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010334:3040589 Shewanella halifaxensis HAW-EB4, complete genome

Host Lineage: Shewanella halifaxensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment in a munitions-dumping area of the Emerald Basin (depth of 215 m, Atlantic Ocean), offshore of Halifax Harbour (Nova Scotia, Canada). It is capable of efficiently degrading RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine), an explosive compound that contaminates the environment. This bacterium is an obligate respiratory organism.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
303924030405921353two component sigma54 specific transcriptional regulator Fis familyQuickGO ontologyBLASTP
304058930423551767histidine kinaseQuickGO ontologyBLASTP
30427263043472747hypothetical protein
304377230458562085diguanylate phosphodiesteraseQuickGO ontologyBLASTP
304715530512464092Proprotein convertase PQuickGO ontologyBLASTP
305123330528281596hypothetical proteinBLASTP
305308630542791194transposase IS204IS1001IS1096IS1165 family proteinQuickGO ontologyBLASTP
305507230570061935Radical SAM domain proteinQuickGO ontologyBLASTP
30573143057658345hypothetical protein
305770130592541554binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
30592563059987732ABC transporter relatedQuickGO ontologyBLASTP
30599923060846855phosphonate ABC transporter periplasmic phosphonate-binding proteinQuickGO ontologyBLASTP
30611333061807675two component transcriptional regulator winged helix familyQuickGO ontologyBLASTP
306179830631501353histidine kinaseQuickGO ontologyBLASTP